DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and Pou4f3

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001102359.1 Gene:Pou4f3 / 364855 RGDID:1310459 Length:338 Species:Rattus norvegicus


Alignment Length:391 Identity:191/391 - (48%)
Similarity:225/391 - (57%) Gaps:84/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKMSAPSCF---PGRYSPSYRS----SEQMRR-CMPNPSIHISSSCDSLESRLLEDASLLCNSWS 68
            |.|:|...|   |....|.:.|    ||.||| |:|.|.:                         
  Rat     2 MAMNAKQPFGMHPVLQEPKFSSLHSGSEAMRRVCLPAPQL------------------------- 41

  Fly    69 ARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHS----MSGPPQRP 129
               .|:||...::.:|:||||||||||..|...|       ..|.|..||..|    .|..|..|
  Rat    42 ---QGNIFGSFDESLLARAEALAAVDIVSHGKNH-------PFKPDATYHTMSSVPCTSTSPTVP 96

  Fly   130 LQENP--FSRQMHHSM------DQLDMLDPTGSMTTLAPISESPLTPTHQHLHGSYHSMNHMMSH 186
            : .:|  .:...||.:      |.|:.:.||.|::.|.       .|.|..:....|.       
  Rat    97 I-SHPAALTSHPHHPVHQGLEGDLLEHISPTLSVSGLG-------APEHSVMPAQIHP------- 146

  Fly   187 HHPGTLSGH----TGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVT 247
            ||.|.: ||    .|..|.|:...|..:.|.::      |.::||||||||||||||||||||||
  Rat   147 HHLGAM-GHLHQAMGMSHPHAVAPHSAMPACLS------DVESDPRELEAFAERFKQRRIKLGVT 204

  Fly   248 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 312
            |||||.||||||:||||:||||||||||||||||||||||||:||||||||||..:.|...|:  
  Rat   205 QADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE-- 267

  Fly   313 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 377
             :....|:||||||||||||||||||||:|||||.||||||||||||||||||||||||||||||
  Rat   268 -LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 331

  Fly   378 I 378
            :
  Rat   332 M 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 69/76 (91%)
Homeobox 323..377 CDD:395001 51/53 (96%)
Pou4f3NP_001102359.1 POU-IV box. /evidence=ECO:0000250|UniProtKB:Q15319 56..65 8/8 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 5/21 (24%)
POU 179..256 CDD:197673 69/76 (91%)
Homeobox 277..331 CDD:395001 51/53 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350533
Domainoid 1 1.000 141 1.000 Domainoid score I4596
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2023
Inparanoid 1 1.050 299 1.000 Inparanoid score I2622
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D396215at33208
OrthoFinder 1 1.000 - - FOG0001337
OrthoInspector 1 1.000 - - otm46288
orthoMCL 1 0.900 - - OOG6_105854
Panther 1 1.100 - - O PTHR11636
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X830
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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