DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou3f1

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571236.1 Gene:pou3f1 / 30398 ZFINID:ZDB-GENE-980526-372 Length:368 Species:Danio rerio


Alignment Length:399 Identity:125/399 - (31%)
Similarity:165/399 - (41%) Gaps:88/399 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MYSTTDKMKMSAPSCFPGRYSPSYRSSEQMRRCMPNPSIHISSSCDSLESRLLEDASLLCNSWSA 69
            |:..:|:|....          :||..::|        :| ......|.:......||..:.|..
Zfish    20 MHPDSDRMHQGT----------TYREVQKM--------MH-HEYLQGLATNTGHPMSLTHHQWLP 65

  Fly    70 RQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHH-HSMSGPPQRPLQEN 133
            ..|.|..:|.:.|                ||:|..:.:.|:......||. |.:..|.|      
Zfish    66 TSNTDWTSGTHIG----------------QAEHNKASVQSREDLGNGYHRSHLVHQPTQ------ 108

  Fly   134 PFSRQMHHSMDQLDMLDPTGSMTTLAPISESPLTPT---HQHL---HGSYHSMNHMMSHHH--PG 190
                ..||           ||.........|||:|.   ||.|   ...|..::...|.||  ..
Zfish   109 ----NSHH-----------GSWAPTTTHHLSPLSPASNGHQSLVYSQTGYTMLSPQPSLHHGLRD 158

  Fly   191 TLSGHTGGHHGHSA------VHHPVITAAVAAAGLHPDTDT-DPRELEAFAERFKQRRIKLGVTQ 248
            .|....|.|.....      .||..          |.|.|. ...:||.||::|||||||||.||
Zfish   159 PLHDDAGSHDNQMESPQQPFSHHQD----------HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQ 213

  Fly   249 ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 313
            ||||.||..|.   ....||:||||||:|.||..||..|||:|..||||.::   |.....:...
Zfish   214 ADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDK 272

  Fly   314 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 378
            :...|.|::|||||....|.:||.:|...|:||..:|..:|..|.|:|.||||||||:|||:||:
Zfish   273 IAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVVRVWFCNRRQKEKRM 337

  Fly   379 VSSVTPSMT 387
            .....|..|
Zfish   338 TPVGVPHPT 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 45/77 (58%)
Homeobox 323..377 CDD:395001 28/53 (53%)
pou3f1NP_571236.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..88 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..134 11/54 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..193 11/55 (20%)
POU 187..261 CDD:197673 44/76 (58%)
Homeobox 282..335 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592227
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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