DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou6f1

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571188.1 Gene:pou6f1 / 30334 ZFINID:ZDB-GENE-980526-530 Length:610 Species:Danio rerio


Alignment Length:364 Identity:102/364 - (28%)
Similarity:161/364 - (44%) Gaps:61/364 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NPSIHISSSCDSLESRLLEDASLLCNSWSARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVH 104
            ||:| ||::....:.:.:...:......||..|   .||:...:::.|:.            .|.
Zfish   270 NPAI-ISAASLGAQPQFISSLTTTPIITSAMSN---VAGLTSQLITNAQG------------QVI 318

  Fly   105 SQMPSQIKHDVMYHHHSMSGPPQRPLQENPFSRQ-MHHSMDQLDML---DPTGSMTTLA---PIS 162
            ..:|..:....:....:.|..|.:.||....:.| :.:|..|:...   .||.::.:.|   |.:
Zfish   319 GTLPLLVNPASLAGAAAASALPAQGLQVQTVAPQLLLNSQGQIIATIGNGPTAAIPSTASVLPKA 383

  Fly   163 ESPLTPTHQHLHGSYHSM--NHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAA-VAAAGLHP--- 221
            ..|||.|.....|....:  :.::....|..:...|.            :||| |.|.|..|   
Zfish   384 TVPLTLTKTTTQGPVGKVAPSKVIIAPQPSVVKPVTS------------LTAAGVIACGEMPTVG 436

  Fly   222 -----------DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 275
                       :...:..|:..||:.||.||:.||:||..||:||...:.|   |.|||.|||||
Zfish   437 QLVNKPSAVKDEEAINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGP---AYSQSAICRFE 498

  Fly   276 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE--KKRKRTSIAAPEK-RSLEA 337
            .|.::..:...|||:|:.||  |||:..|::...:....: .||  |||||.:...|:. ..|..
Zfish   499 KLDITPKSAQKLKPVLERWL--AEAELWNQKGQQNLMEFV-GGEPSKKRKRRTSFTPQAIEVLNT 560

  Fly   338 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 376
            ||.....|:|::|..||::|:..:.||||||||:||..|
Zfish   561 YFEKNSLPTGQEITEIAKELNYDREVVRVWFCNRRQTLK 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 32/76 (42%)
Homeodomain 321..377 CDD:459649 25/57 (44%)
pou6f1NP_571188.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..87
POU 448..522 CDD:197673 34/78 (44%)
Homeodomain 544..600 CDD:459649 24/56 (43%)
Blue background indicates that the domain is not in the aligned region.

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