DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou5f3

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571187.1 Gene:pou5f3 / 30333 ZFINID:ZDB-GENE-980526-485 Length:472 Species:Danio rerio


Alignment Length:337 Identity:110/337 - (32%)
Similarity:159/337 - (47%) Gaps:73/337 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QMPSQIK--HDVMYHHHSMSGPPQRPLQENPFSRQMHHSMDQLDMLDPTG--------------- 153
            :|||::|  .||..:.:..:.||.          |.|.:.....:  |||               
Zfish   126 KMPSEVKTEKDVEEYGNEENKPPS----------QYHLTAGTSSV--PTGVNYYTPWNPNFWPGL 178

  Fly   154 -SMTTLAPISESPLTPTHQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVA-- 215
             .:|..|.||::|.||:         :.:..:|...||...|..|...|.:|.:.|...|..|  
Zfish   179 SQITAQANISQAPPTPS---------ASSPSLSPSPPGNGFGSPGFFSGGTAQNIPSAQAQSAPR 234

  Fly   216 ----AAGLHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANL--KLPGVGALSQST 270
                ::|...|::.:    ..:||.||:..|.:||.||.||||||.||.||  |:     .||:|
Zfish   235 SSGSSSGGCSDSEEEETLTTEDLEQFAKELKHKRITLGFTQADVGLALGNLYGKM-----FSQTT 294

  Fly   271 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 335
            |||||:|.||..||..|||:||.||.||| .::|.:.......|.....|:::|||:....:.:|
Zfish   295 ICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSENPQDMYKIERVFVDTRKRKRRTSLEGTVRSAL 358

  Fly   336 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIV----------------SSVTP 384
            |:||...|:|:..:|..|::.|.|:::||||||||:|||.||:.                ....|
Zfish   359 ESYFVKCPKPNTLEITHISDDLGLERDVVRVWFCNRRQKGKRLALPFDDECVEAQYYEQSPPPPP 423

  Fly   385 SMTGHGSAGFGY 396
            .|.|....|.||
Zfish   424 HMGGTVLPGQGY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 42/82 (51%)
Homeodomain 321..377 CDD:459649 24/55 (44%)
pou5f3NP_571187.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..255 17/76 (22%)
POU 259..323 CDD:197673 39/68 (57%)
Homeodomain 344..400 CDD:459649 24/55 (44%)

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