DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou5f3

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571187.1 Gene:pou5f3 / 30333 ZFINID:ZDB-GENE-980526-485 Length:472 Species:Danio rerio


Alignment Length:337 Identity:110/337 - (32%)
Similarity:159/337 - (47%) Gaps:73/337 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QMPSQIK--HDVMYHHHSMSGPPQRPLQENPFSRQMHHSMDQLDMLDPTG--------------- 153
            :|||::|  .||..:.:..:.||.          |.|.:.....:  |||               
Zfish   126 KMPSEVKTEKDVEEYGNEENKPPS----------QYHLTAGTSSV--PTGVNYYTPWNPNFWPGL 178

  Fly   154 -SMTTLAPISESPLTPTHQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVA-- 215
             .:|..|.||::|.||:         :.:..:|...||...|..|...|.:|.:.|...|..|  
Zfish   179 SQITAQANISQAPPTPS---------ASSPSLSPSPPGNGFGSPGFFSGGTAQNIPSAQAQSAPR 234

  Fly   216 ----AAGLHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANL--KLPGVGALSQST 270
                ::|...|::.:    ..:||.||:..|.:||.||.||||||.||.||  |:     .||:|
Zfish   235 SSGSSSGGCSDSEEEETLTTEDLEQFAKELKHKRITLGFTQADVGLALGNLYGKM-----FSQTT 294

  Fly   271 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 335
            |||||:|.||..||..|||:||.||.||| .::|.:.......|.....|:::|||:....:.:|
Zfish   295 ICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSENPQDMYKIERVFVDTRKRKRRTSLEGTVRSAL 358

  Fly   336 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIV----------------SSVTP 384
            |:||...|:|:..:|..|::.|.|:::||||||||:|||.||:.                ....|
Zfish   359 ESYFVKCPKPNTLEITHISDDLGLERDVVRVWFCNRRQKGKRLALPFDDECVEAQYYEQSPPPPP 423

  Fly   385 SMTGHGSAGFGY 396
            .|.|....|.||
Zfish   424 HMGGTVLPGQGY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 42/82 (51%)
Homeobox 323..377 CDD:395001 24/53 (45%)
pou5f3NP_571187.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..255 17/76 (22%)
POU 259..323 CDD:197673 39/68 (57%)
Homeobox 346..399 CDD:278475 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592226
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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