DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and Hdx

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001074018.1 Gene:Hdx / 245596 MGIID:2685226 Length:692 Species:Mus musculus


Alignment Length:383 Identity:71/383 - (18%)
Similarity:119/383 - (31%) Gaps:124/383 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YSPSYRSSEQMRRCMPNPSIHISSSCDSLESRLLEDASLLCNSWSARQNGDIFAGINDGILSRAE 88
            |.|.:........|...|:|. ...|.:....:.|..||..:.:..|    |..|.:....:.||
Mouse   233 YKPEHAGLASHNLCGQKPTIR-DPCCRTQNLEIREVFSLAVSDYPQR----ILGGNSTQKPASAE 292

  Fly    89 ------ALAAVDIQKHQAQHVH-SQMPSQIKHDVMYHHHSMSGPPQRPLQENPFS------RQMH 140
                  |:...|.:...|:... :.|.:||   ..|.....||...|  .||..:      |.: 
Mouse   293 GTCLSIAMETGDAEDEYAREEELASMGAQI---TSYSRFYESGNSLR--AENQSTNLPGPGRNL- 351

  Fly   141 HSMDQLDMLDPTGSMTTLAPISESPLTPTHQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAV 205
                      |...|..:..:|::.|..|.     .||             |:..|..|...|.:
Mouse   352 ----------PNSQMVNIRDLSDNVLYQTR-----DYH-------------LTPRTSLHTASSTM 388

  Fly   206 HHPVITAAVAAAGLHPDTDTDPRELEAFAERF-KQRRIKLGVTQADVGKALANLKLPGVGALSQS 269
            :                ::|:|.. ..|:..| ...:::|...|.:. :...||.:|.:...|: 
Mouse   389 Y----------------SNTNPSR-SNFSPHFVSSNQLRLSQNQNNY-QISGNLSVPWITGCSR- 434

  Fly   270 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRS 334
                              |..||                              .||..:..:..:
Mouse   435 ------------------KRALQ------------------------------DRTQFSDRDLAT 451

  Fly   335 LEAYFAVQPRPSG----EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIVSSVTPSMTG 388
            |:.|:.......|    |||.|:|.:|::...:||.|..|:|:|.:.:...|.|...|
Mouse   452 LKKYWDNGMTSLGSVCREKIEAVAIELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGG 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 13/77 (17%)
Homeodomain 321..377 CDD:459649 17/59 (29%)
HdxNP_001074018.1 HOX 4..59 CDD:197696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..136
homeodomain 441..497 CDD:238039 17/55 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 505..541 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 647..692
Blue background indicates that the domain is not in the aligned region.

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