DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and Pou3f3

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_032926.2 Gene:Pou3f3 / 18993 MGIID:102564 Length:497 Species:Mus musculus


Alignment Length:303 Identity:115/303 - (37%)
Similarity:154/303 - (50%) Gaps:51/303 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 HHHSMSGPPQRPLQENPFSRQMHHSMDQLDMLDP----------TGSMTTLAP---ISESPLTPT 169
            |..||:|..|.|.|...:|:....:::.:....|          .|:.:.:.|   ..::|....
Mouse   204 HLPSMAGGQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDTPELAE 268

  Fly   170 HQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGL-----HPDTDTDPR- 228
            |.|.|       |..:|.||    .|.  ||.....||   ....|..||     |.|.||... 
Mouse   269 HHHHH-------HHHAHPHP----PHP--HHAQGPPHH---GGGGAGPGLNSHDPHSDEDTPTSD 317

  Fly   229 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 293
            :||.||::|||||||||.||||||.||..|.   ....||:||||||:|.||..||..|||:|..
Mouse   318 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNK 379

  Fly   294 WLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 357
            |||||::...:    |.:...:.| |.|::|||||....|.:||::|...|:||.::|..:|:.|
Mouse   380 WLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSL 440

  Fly   358 DLKKNVVRVWFCNQRQKQKRI----VSSVTP----SMTGHGSA 392
            .|:|.||||||||:|||:||:    :...||    |..|..||
Mouse   441 QLEKEVVRVWFCNRRQKEKRMTPPGIQQQTPDDVYSQVGTVSA 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 46/77 (60%)
Homeodomain 321..377 CDD:459649 28/55 (51%)
Pou3f3NP_032926.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..316 23/101 (23%)
POU 311..385 CDD:197673 45/76 (59%)
Homeodomain 404..460 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 458..497 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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