DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and Pou2f1

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_035267.2 Gene:Pou2f1 / 18986 MGIID:101898 Length:793 Species:Mus musculus


Alignment Length:439 Identity:132/439 - (30%)
Similarity:188/439 - (42%) Gaps:123/439 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DKMKMSAPSCFPGRYSPSYRSS-EQMRRCMPNPSIHISSSCDSLESRLLEDASLLCNSWSARQNG 73
            |..:.|.||..|    ||.:|: .|.:..:....|...:...:.:..||:.|.            
Mouse   103 DSQQSSQPSSQP----PSVQSAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQ------------ 151

  Fly    74 DIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQENPFS-- 136
                       ::|:.|||. :|:|.|...||...:.|           |.....|:.:.|.|  
Mouse   152 -----------AQAQLLAAA-VQQHSASQQHSAAGATI-----------SASAATPMTQIPLSQP 193

  Fly   137 -------------RQMHHSMDQLDMLDPTGSMTTLAP----ISESP------------LTPTHQH 172
                         :|.:.::.|..::.||   |.|.|    ||::|            ||...| 
Mouse   194 IQIAQDLQQLQQLQQQNLNLQQFVLVHPT---TNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQ- 254

  Fly   173 LHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPR--------- 228
                 .|..:::......||:         |....|..|.|.|:....|.:.:.|:         
Mouse   255 -----QSQANLLQPQPSITLT---------SQPTTPTRTIAAASVQTLPQSQSTPKRIDTPSLEE 305

  Fly   229 -----ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 288
                 |||.||:.|||||||||.||.|||.|:.  ||.| ...||:||.|||:|.||..||..||
Mouse   306 PSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLK 367

  Fly   289 PILQAWLEEAEAQAKNKRRDPDA--PSVLPA--------GEKKRKRTSIAAPEKRSLEAYFAVQP 343
            |:|:.||.:||    |...|..|  ||.|.:        ..:::|||||....:.:||..|....
Mouse   368 PLLEKWLNDAE----NLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQ 428

  Fly   344 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIVSSVTPSMTGHGSA 392
            :|:.|.|..|||:|:::|.|:||||||:|||:|||   ..||..|..|:
Mouse   429 KPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI---NPPSSGGTSSS 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 42/90 (47%)
Homeobox 323..377 CDD:395001 26/53 (49%)
Pou2f1NP_035267.2 POU 304..378 CDD:197673 41/76 (54%)
Homeobox 408..461 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847024
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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