Protein Alignment acj6 and Pou4f1

DIOPT Version :10

• Sequence 1: NP_524876.1
• Gene: acj6 / 47080
• FlyBaseID: FBgn0000028
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_001406467.1
• Gene: Pou4f1 / 114503
• RGDID: 620074
• Length: 421
• Species: Rattus norvegicus
• Alignment Length: 461
• Identity: 202/461 - (43%)
• Similarity: 238/461 - (51%)
• Gaps: 122/461 - (26%)

  Fly     3 MSMYSTTDKMKMSAPSCFPGRYSPSYRSSEQMRR-CMPNPSIHISSSCDSLESRLLEDASLLCNS 66
            |||.|......|. |:....:|...:.|||.:|| |:|.|.:
  Rat     2 MSMNSKQPHFAMH-PTLPEHKYPSLHSSSEAIRRACLPTPPL----------------------- 42

  Fly    67 WSARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQ 131
                 ..::||.:::.:|:||||||||||...|.:      ....|.|..|  |:|:..|.....
  Rat    43 -----QSNLFASLDETLLARAEALAAVDIAVSQGK------SHPFKPDATY--HTMNSVPCTSTS 94

  Fly   132 ENPFSRQMHH-----SMDQLDMLD--PTGSMTTLA-----------------------------P 160
            ..|.:...||     :::..|:||  .:.|:..:|                             |
  Rat    95 TVPLAHHHHHHHHHQALEPGDLLDHISSPSLALMAGAGGAGAAGGGGGAHDGPGGAGGPGGGGGP 159

  Fly   161 ISESP-----------------------LTPTHQHLHGSYH--------SMNHMMSHHHPGTLSG 194
            ....|                       ....|.|:||..|        :||......|||.::
  Rat   160 GGGGPGGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHGLGHLSHPAAAAAMNMPSGLPHPGLVA- 223

  Fly   195 HTGGHHGHSA----------VHHPVITAAVAAAGLHP--DTDTDPRELEAFAERFKQRRIKLGVT 247
             ...|||.:|          .......|.|.||||..  |:||||||||||||||||||||||||
  Rat   224 -AAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERFKQRRIKLGVT 287

  Fly   248 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 312
            |||||.||||||:||||:||||||||||||||||||||||||||||||||||...:.|...|:
  Rat   288 QADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE-- 350

  Fly   313 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 377
             :...|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
  Rat   351 -LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 414

  Fly   378 IVSSVT 383
            :..|.|
  Rat   415 MKFSAT 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
acj6	NP_524876.1	POU	222..299	CDD:197673	72/76 (95%)
		Homeodomain	321..377	CDD:459649	54/55 (98%)
Pou4f1	NP_001406467.1	POU	262..339	CDD:197673	72/76 (95%)
		Homeodomain	358..414	CDD:459649	54/55 (98%)