DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou2f2a

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_073787549.1 Gene:pou2f2a / 100537384 ZFINID:ZDB-GENE-060310-2 Length:721 Species:Danio rerio


Alignment Length:352 Identity:122/352 - (34%)
Similarity:164/352 - (46%) Gaps:80/352 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 AEALAAVDIQ--KHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQENPFSRQMHHSMDQLDML 149
            |.|.||.:.|  :.||....:|..||.|.:        ..||  ||...|.         ||...
Zfish   194 AHAAAAANQQQSQQQANQAAAQAQSQAKAE--------QAPP--PLLSQPI---------QLTAQ 239

  Fly   150 DPTGSMTTLAPISESPLTPTH----------------QHLHGSYHSMNHM-MSHHHPGTLSGHTG 197
            |    :..|..:.:..|.|.|                |...|...:.|.: :....||:|. .|.
Zfish   240 D----IQQLLQLQQLVLMPGHPLQSPAQFLLPQAQAQQGQQGLLSTPNLIPLPQQSPGSLL-TTP 299

  Fly   198 GHHGHSAVHH---------------PVITAAVAAA---------GLHPDTDTDPRELEAFAERFK 238
            ...|..|.||               .|:::|.::|         ..||:..:|..|||.||..||
Zfish   300 PRLGLQAQHHLDDRLWSLQREKSVESVVSSAPSSAPPMSSAPTVTPHPEEPSDLEELEQFARTFK 364

  Fly   239 QRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA- 302
            |||||||.||.|||.|:.  ||.| ...||:||.|||:|.||..||..|||:|:.||.:||..| 
Zfish   365 QRRIKLGFTQGDVGMAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAI 426

  Fly   303 KNKRRDPDAPSV-------LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 360
            .|....|.:.|.       || |.:::|||||....:.:||..|....:|:.|:|..:||:|:::
Zfish   427 DNMLPSPSSLSSPLLGFEGLP-GRRRKKRTSIETNVRIALERNFISNQKPTSEEILLMAEQLNME 490

  Fly   361 KNVVRVWFCNQRQKQKRI-VSSVTPSM 386
            |.|:||||||:|||:||| .||.||.:
Zfish   491 KEVIRVWFCNRRQKEKRINPSSATPPL 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 42/76 (55%)
Homeodomain 321..377 CDD:459649 25/55 (45%)
pou2f2aXP_073787549.1 None

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