DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou1f1

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_031752450.1 Gene:pou1f1 / 100492413 XenbaseID:XB-GENE-854097 Length:373 Species:Xenopus tropicalis


Alignment Length:333 Identity:108/333 - (32%)
Similarity:158/333 - (47%) Gaps:67/333 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQENP---FSRQMHHSMDQLDMLDP 151
            |:.|.|.|  ..||:..:|.........|:            .||   :..|...:...:..:.|
 Frog    52 LSLVQIPK--CSHVYVSVPDVDNTPAGLHY------------PNPSCHYGNQHQSTYGVMAGIKP 102

  Fly   152 TGSMTTLAPISESPLTPTHQ-----------HLHGSYHSMNHMMSHH-HPGTL-------SGHTG 197
            |......|.||::.:..|..           .|.|.:....:.::.. |.|:|       |..|.
 Frog   103 TAPEMLSASISQTRILQTCSMPLSNVVNGVGTLQGKWKVHGYTLAFSVHAGSLPPCLMSASSCTI 167

  Fly   198 GHHGHSAVHHPVITAAVAAAGLHP-------------DTDT-DPRELEAFAERFKQRRIKLGVTQ 248
            | ||.:.||..::...:.......             |.|: :.||||.||..||.||||||.||
 Frog   168 G-HGFTPVHQSLLGEDITTTDFKQEFRRKNKPIDEPIDMDSPEIRELEKFANEFKVRRIKLGYTQ 231

  Fly   249 ADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQAKNKRRDPD 310
            .:||:|||.:.    |: .||:||||||:|.||..|...||.||..||:|||  ....|::    
 Frog   232 TNVGEALAAVH----GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGALYNEK---- 288

  Fly   311 APSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 374
                :...|:||| ||:|:...|.:||::|..|.:||.::|..:||.|:|:|.||||||||:||:
 Frog   289 ----IGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQR 349

  Fly   375 QKRIVSSV 382
            :||:.:|:
 Frog   350 EKRVKTSL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 43/78 (55%)
Homeobox 323..377 CDD:395001 27/54 (50%)
pou1f1XP_031752450.1 POU 205..279 CDD:197673 42/77 (55%)
Homeobox 298..352 CDD:395001 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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