DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment acj6 and pou2f3

DIOPT Version :10

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_031762183.1 Gene:pou2f3 / 100490595 XenbaseID:XB-GENE-853632 Length:506 Species:Xenopus tropicalis


Alignment Length:429 Identity:136/429 - (31%)
Similarity:191/429 - (44%) Gaps:106/429 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KMKMSAPS-CF-PGRYSPSYRSSEQMRRCMPNPSIHISSSCDSLESRLLEDASLLCNSWSARQNG 73
            ::::|.|| |. |..:||....|||     ..|:.||...........:...||.|...:.:...
 Frog    28 ELEISLPSLCLDPLPFSPPLCHSEQ-----TEPAEHIEPGEHIEPEEYILYVSLPCMMVNLQYTH 87

  Fly    74 DIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVM----------YHHHSMSGPPQR 128
            .:.:.||   :|| |..:.|     :.||....:.:..:.|.:          :.....||.|.|
 Frog    88 PVPSHIN---MSR-EPDSTV-----EQQHGSGNLENDTERDTLDFGKQIKTEDFSEALQSGIPHR 143

  Fly   129 PLQENPFSRQMHHSMDQLDML---DPTGSMTTLAPISESPLTPTH----------QHLHGSYHSM 180
            |..           :.|..|:   ..:|.||:|.|:.:..|.|:|          |...|....:
 Frog   144 PCH-----------LSQGSMIGGGQMSGEMTSLHPLQQLVLVPSHLQPASPYLLSQSQSGQQGLL 197

  Fly   181 --NHM-MSHHHPGTLSGHTG-------------------GH----HGHSAVHHPVITAAVAAAGL 219
              ||: :|....|.|...||                   .|    |.|...|.|::         
 Frog   198 QPNHLSLSQQQGGILQPQTGLGLASQAVGRPGLPGSPLESHLEMGHLHVPKHLPMV--------- 253

  Fly   220 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 284
             ||..:|..|||.||:.|||||||||.||.|||.|:.  ||.| ...||:||.|||:|.||..||
 Frog   254 -PDEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 314

  Fly   285 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA----------GEKKRKRTSIAAPEKRSLEAYF 339
            ..|||:|:.||.:||:.       |...::.|:          |.|::|||||....:.:||..|
 Frog   315 CKLKPLLEKWLNDAESA-------PSDAALTPSTNYAQLSEMFGRKRKKRTSIETNIRLTLEKRF 372

  Fly   340 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 378
            ...|:||.|:|:.|||:|.::|.||||||||:|||:|||
 Frog   373 QDNPKPSSEEISMIAEQLVMEKEVVRVWFCNRRQKEKRI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 43/76 (57%)
Homeodomain 321..377 CDD:459649 29/55 (53%)
pou2f3XP_031762183.1 POU 255..329 CDD:197673 43/76 (57%)
Homeodomain 354..410 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.