DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment acj6 and pou6f2

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_021325963.1 Gene:pou6f2 / 100001518 ZFINID:ZDB-GENE-091118-71 Length:719 Species:Danio rerio


Alignment Length:464 Identity:111/464 - (23%)
Similarity:186/464 - (40%) Gaps:132/464 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PSCFPGRYS--------PSYRSSEQMRRCMPNP----------SIHISSSCDS--------LESR 55
            |:|.|..:|        ||:|.::...|.:|:|          :.|:....:|        |.|.
Zfish   261 PTCPPSNHSSAQPPQSPPSHRQNQSPARSLPSPVTPPLPLQGNAFHLLRQRESEGERKRECLPSD 325

  Fly    56 LLEDASLLCNSWSARQNGDIFAG--INDGILSRAEALAAVDIQKHQAQHVHS--QMPSQIKHDVM 116
            .|...:......:|...|.| ||  :....||..:.:....:...|.|.:.:  .||:.:...  
Zfish   326 RLNPLASQAAVAAAAAMGSI-AGSQVFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNSVGPS-- 387

  Fly   117 YHHHSMSGPPQRPLQENPFSRQ-MHHSMDQ----------LDMLDPTGSMTTLAPI--------- 161
                :.||....|||..|.:.| :.::..|          |.:::..|  .||:||         
Zfish   388 ----NQSGGGTSPLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQG--ITLSPIKPGQQLPQT 446

  Fly   162 SESPLTP--THQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTD 224
            .::|..|  :..:|....||.:.:.......:.|..:              ::|::...|..:..
Zfish   447 GQTPQAPPVSQPNLLRMPHSQSPLRQASSSSSTSSSS--------------SSALSVGQLVSNPQ 497

  Fly   225 TDPRELEA--------FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC--------- 272
            |.|.|::.        ||:.||.||:.||:||..||:||:..:.|   |.|||.||         
Zfish   498 TAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGP---AYSQSAICRHTILRSHF 559

  Fly   273 ---------------------------RFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRD-- 308
                                       |||.|.::..:...:||:|:.|:.||||:.::..::  
Zfish   560 FLPQEAQENTIASSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLT 624

  Fly   309 ---PDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 370
               ...||     :|:::|||........|.::|.....|||:::..|||||:..:.||||||||
Zfish   625 EFIGSEPS-----KKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCN 684

  Fly   371 QRQKQKRIV 379
            :||..|..:
Zfish   685 KRQALKNTI 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 33/120 (28%)
Homeobox 323..377 CDD:395001 23/53 (43%)
pou6f2XP_021325963.1 E3_binding <238..>308 CDD:332172 11/46 (24%)
Pou 504..613 CDD:328965 30/111 (27%)
Homeobox 637..690 CDD:306543 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592237
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.