DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and nyo

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster


Alignment Length:383 Identity:94/383 - (24%)
Similarity:144/383 - (37%) Gaps:88/383 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KGYPDERCQPQIDGSLAV-FRLSLSDFYECGVT-----RMVNQLTGKKVYYHKIIIESTSGKEIV 119
            ||.| :.|...::.||.. ||:..:|. ||.|.     |.:|.:.   :.:|.:|:.|:.....|
  Fly   405 KGAP-KSCAVNVNNSLEFDFRMGYNDL-ECNVRQSAYGRYMNDIV---IQHHDMIVTSSDLGLAV 464

  Fly   120 SVKCITTASPAYNVMMNATTGSSSTSTSSGGIHGLVKRDVLPAGFQEPEDLEITTSLTKRAPEPR 184
            |.:...|.....|.:....||...:|.|.                      |||..    :|...
  Fly   465 SCQYDLTNKTVLNDVDLGVTGEIESSLSE----------------------EITID----SPNVI 503

  Fly   185 LSIGVSQDGQKFTRDLTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSE-TLI-FKGCT 247
            :.| .|:||....|...|  |.||.:...:.|.::| |.:.|..|...|...|:| ||| ..||.
  Fly   504 MKI-TSRDGSDMKRMAEV--GDPLALRFEIVEPNSP-YEIFVRELVAMDGSDSAEITLIDANGCP 564

  Fly   248 VDPYLFENFNTI--DGDILSAKFKAFKFPDSSYVQFRATVNVCLDKCLGTQCSNNQ--------- 301
            .|.|:......:  :..:|.::|.|||||.|..|||||.|..|:.:|....|.:..         
  Fly   565 TDQYIMGTIQKLAQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVICDSEDGASGELKSL 629

  Fly   302 VGFGRRKREISSANKVYEISLAMFLQVQDIEGVNKNEVLQLEEKLRELKLANQRLARNSRGNFAM 366
            |.:||:||.:.:.....|. |......:|:..|:.|.:|....::.:...........:.||   
  Fly   630 VSYGRKKRSVLNGTDGAEF-LISTRHRRDVGPVDDNILLMQSIQITDKFGFQPEDGTTTHGN--- 690

  Fly   367 EQTPASAQPAFVVDERELGHLSAGSGAASNGLS---------------LALWTILGAW 409
            :..|               |..|.:|.|.:.|:               ||..:|.|.|
  Fly   691 DSGP---------------HEKAYAGVAQDKLTCLNGYGLIMAGALFLLAQLSIFGIW 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 69/246 (28%)
nyoNP_651871.2 PAN_1 121..198 CDD:459635
PAN_AP_HGF 208..286 CDD:238532
PAN_1 295..358 CDD:459635
ZP 382..618 CDD:214579 70/247 (28%)
Blue background indicates that the domain is not in the aligned region.

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