DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and pio

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster


Alignment Length:379 Identity:84/379 - (22%)
Similarity:136/379 - (35%) Gaps:81/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SHKVHCSEDQMRVDIGLPDAESKDQS---APQIYLEGLKGYPDERCQPQIDGSLAVFRLSLSDFY 87
            |.::.|....|.:.|  .||....::   :..||.:||.  .:..|..:....:...|..|.   
  Fly    62 SVRIKCLSGSMLITI--KDAPPNHETGLFSGMIYPKGLS--KNSTCLSEYRDHVGSLRYKLP--- 119

  Fly    88 ECGVTRMVNQL-----TGKKVYYHKIIIESTSGKEIVSVKCITTASPAYNVMMNATTGSSSTSTS 147
                .|..|.:     .|...:::.|:::.       .:|.||.....|:|.....:..::....
  Fly   120 ----LRSCNTMPKETDDGGIEFFNTIVLQP-------HLKLITDLGRGYHVRCAYKSRDAAMKPK 173

  Fly   148 SGGIHGLVKRDVLPAGFQEPEDLEITTSLTKR--------------------------APEPRLS 186
            .    .|.|....|..|:..:..|...||.|:                          .|.|...
  Fly   174 K----YLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCH 234

  Fly   187 IGVSQDGQKFTRDLTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETLIF--KGCTVD 249
            :.:..|..|...|  ||.|.|||:.|::|:..  ||||.|....|.|.....|..:.  .||.:|
  Fly   235 MKIYNDEHKIADD--VKIGDPLTIVISIDKQK--VYGLHVTDCIVRDGLGWGEQRLVGEDGCPMD 295

  Fly   250 PYLFENFN-TIDGDILSAKFKAFKFPDSSYVQFRATVNVCL---DKCL-GTQCSNNQVGFGRRKR 309
            ..:...|| |.|....:..|.|.|||.::.|.::..|.:|.   ..|. ..|||      |:|.:
  Fly   296 NEIMGQFNYTQDRLAANVTFPAHKFPYTTSVYYQCNVRLCALEDPTCQEAPQCS------GKRPK 354

  Fly   310 EISSANKVYEISLAMFLQVQDIEGVNKNE--------VLQLEEKLRELKLANQR 355
            ..::|:...|..|...::|.....||:||        .:..|:.|.:....:||
  Fly   355 RQAAADSKEEDGLPATIEVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 67/308 (22%)
pioNP_726461.1 ZP 66..349 CDD:214579 67/308 (22%)

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