DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qsm and tyn

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster


Alignment Length:360 Identity:91/360 - (25%)
Similarity:149/360 - (41%) Gaps:79/360 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VHCSEDQMRVDIGLPDAESKDQSAPQIYLEGLKGYPDERCQPQIDGSLAVFRLSLSDFYECGVTR 93
            |||.:.::.|.:     .:......:||..|    ..|.|...:..|.| |||.|:   ..|...
  Fly   381 VHCKDTRIAVQV-----RTNKPFNGRIYALG----RSETCNIDVINSDA-FRLDLT---MAGQDC 432

  Fly    94 MVNQLTGKKVYYHKIIIE-----STSGKEIVSVKCITTASPAYNVMMNATTGSSSTSTSSGGIHG 153
            ....:||  ||.:.::::     .|...:|..|||              |...||.:.:.|    
  Fly   433 NTQSVTG--VYSNTVVLQHHSVVMTKADKIYKVKC--------------TYDMSSKNITFG---- 477

  Fly   154 LVKRDVLPAGFQEPEDLEITTSLTKRAPEPRLSIGVSQDGQKFTRDL-TVKSGTPLTMEINLDED 217
                 ::|  .::||.:.|.:|  ..||.||:.|..::.     |:: ||:.|..|...|.:.||
  Fly   478 -----MMP--IRDPEMIHINSS--PEAPPPRIRILDTRQ-----REVETVRIGDRLNFRIEIPED 528

  Fly   218 SAPVYGLGVN--YLDVTDTHTSSETLIFKGCTVDPYLFENFNTIDGDILSAKFKAFKFPDSSYVQ 280
            :.  ||:...  .....|..||.:.:...||..||.:|..| |.||:.|.:.::||:|.:|..|.
  Fly   529 TP--YGIFARSCVAMAKDARTSFKIIDDDGCPTDPTIFPGF-TADGNALQSTYEAFRFTESYGVI 590

  Fly   281 FRATVNVCLDKCLGTQCSNNQVGF---GRRKREISSANKVYEISLAMFLQVQDIEGVNKNEVLQL 342
            |:..|..||..|....|..|...|   |||:|....:|..         :.:|...::: |:|.|
  Fly   591 FQCNVKYCLGPCEPAVCEWNMDSFESLGRRRRRSIESNDT---------KSEDDMNISQ-EILVL 645

  Fly   343 E--EKLRELKLANQRLARNSRGNFAMEQTPASAQP 375
            :  ::.||...|:...      :||.::|....:|
  Fly   646 DFGDEKREFFKADPST------DFAKDKTVTIIEP 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 71/275 (26%)
tynNP_001027032.1 PAN_4 46..97 CDD:433846
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:459635
ZP 382..598 CDD:214579 68/265 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.