DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qsm and cyr

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_572442.1 Gene:cyr / 31733 FlyBaseID:FBgn0030001 Length:513 Species:Drosophila melanogaster


Alignment Length:318 Identity:66/318 - (20%)
Similarity:115/318 - (36%) Gaps:97/318 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVHCSED--QMRVDIGLP------------DAESKDQSAPQIYLEGLKGYPDERC----QPQIDG 74
            :|:||.:  :|.:::..|            :..::.:.:.:::|.    .|...|    :|..||
  Fly    72 QVNCSRELLEMHLELSRPFRGLLYAKDFPLECRARGKDSTRLHLR----IPTSGCGVRAEPLEDG 132

  Fly    75 SLAVFRLSLSDFYECGVTRMVNQLTGKKVYYHKIIIESTSGKEIVSVKCITTASPAYNVM----- 134
            ||..            ..|::.|...|       :.:||.  .:.||:|...|    |.|     
  Fly   133 SLEY------------TVRVMLQKEQK-------LRQSTD--ILSSVRCQLPA----NAMGMPLP 172

  Fly   135 -MNATTGSSSTSTSSGGIHGLVKRDVLPAGFQEPEDLEITTSLTKRAPE-PRLSIGVSQDGQKFT 197
             :....|....:.    :..|.....:||       |..|:|:.::..| ||:.|.:...|...|
  Fly   173 VLRQEKGHDRNAR----MRALAAAAAVPA-------LGATSSINQQQRETPRVRIWLELGGPNGT 226

  Fly   198 RDLTVKSGTPLTMEI----NLD---EDSAPVYGLGVNYLDVTDTHTSSETLIFKGCTVDPYLFEN 255
            ..:.|...|.||:..    |:.   .|.|.:.|||         .::.:.|..:||.:|..:...
  Fly   227 GSVEVGVATTLTVRAIVPGNIGVRVVDCAALDGLG---------ESTQQLLDARGCPIDEQVMPA 282

  Fly   256 FNT------------IDGDIL----SAKFKAFKFPDSSYVQFRATVNVCLDKCLGTQC 297
            .:|            .:.|::    :|.|.||||||...:.....|.:|..||....|
  Fly   283 LHTQHRPAEEGWSKQHEEDLVERTFAATFPAFKFPDRERLHVSCGVQLCKGKCPTLNC 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 65/316 (21%)
cyrNP_572442.1 ZP 82..344 CDD:214579 63/308 (20%)

Return to query results.
Submit another query.