DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and cutl-17

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001379101.1 Gene:cutl-17 / 185474 WormBaseID:WBGene00009541 Length:912 Species:Caenorhabditis elegans


Alignment Length:152 Identity:35/152 - (23%)
Similarity:66/152 - (43%) Gaps:24/152 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 LIFKGC---TVDPYLFENFNTIDGDILSAKFKAFKFPDSSYVQFRATVNVCLDKCLGTQCSNNQV 302
            :|::||   .|...|..:....:|::.|.|.|.|:|..|..|:.:.:::||::||....|.:.::
 Worm   684 IIYQGCPEEKVRNRLLHDPVVKNGEVYSTKMKVFRFDGSRRVRIKCSIDVCVEKCPPVICDDLEI 748

  Fly   303 ----GFGRRKREISSANKVYEISLAMFLQVQDIEGVNKNEVLQLEEKLRELKLANQRLARNS--- 360
                .|||:||. |:..|.             ::..||.|..:.......|.:.::.....:   
 Worm   749 RNVDSFGRKKRN-SNVEKW-------------LKAGNKKETRKRRMVTGTLTITDEEETNTTVKP 799

  Fly   361 RGNFAMEQTPASAQPAFVVDER 382
            |..|:...:.:|.|...|..:|
 Worm   800 RPEFSTSSSSSSQQQYCVQKDR 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 17/59 (29%)
cutl-17NP_001379101.1 PAN_1 27..106 CDD:459635
PAN_AP_HGF 114..199 CDD:238532
PAN_AP 208..295 CDD:214680
PAN_AP_HGF 308..380 CDD:238532
ZP 509..744 CDD:214579 17/59 (29%)
Blue background indicates that the domain is not in the aligned region.

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