DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and C30H6.5

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001255948.1 Gene:C30H6.5 / 183068 WormBaseID:WBGene00007823 Length:530 Species:Caenorhabditis elegans


Alignment Length:296 Identity:59/296 - (19%)
Similarity:85/296 - (28%) Gaps:129/296 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QMRVDIGLPDAESKDQSAPQIYLEGLK-----------------------GYPDERCQPQIDGSL 76
            |::.|:|....|.:.:|...:.||.|.                       |...|.|..|.    
 Worm   292 QLQSDVGSLTKERRQRSERPVVLENLAVPAGCFIKTPNRILHKFEESRIGGVTLETCMRQC---- 352

  Fly    77 AVFRLSLSDFYECGVTRMVNQLTGKKVYYHKII----IESTSGKEIVSVKCITTASPAYNVMMNA 137
               ..||.:|| |.   .:|...|.|:.   |:    :....|..:|       .|..::...|.
 Worm   353 ---AQSLQNFY-CA---SINYSFGLKIC---ILNGGNLHLNGGDTLV-------GSREFDYFENT 400

  Fly   138 TTGSSSTSTSS--GG------IHGLVKRDV-------LPAGFQEPEDLEITTSLTKRAPEPRLSI 187
            ....|:|:|.|  ||      .:.|....:       :..|.|:.|..|...|.:          
 Worm   401 CQPRSTTTTESSIGGSGTKKECYRLYNNSIYNSFDATIVGGLQDLESCESECSWS---------- 455

  Fly   188 GVSQDGQKFTRDLTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETLIFKGCTVDPYL 252
                                   .|...|..     ||||::..|           :||    .|
 Worm   456 -----------------------HIRRREKC-----LGVNWIPTT-----------RGC----ML 477

  Fly   253 FENFNTIDGDILSAKFKAFKFPDSSYVQFRATVNVC 288
            |.  ..||.::|...|||         ||.|  |.|
 Worm   478 FH--KQIDFNVLQPSFKA---------QFLA--NTC 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 59/296 (20%)
C30H6.5NP_001255948.1 PAN_AP_HGF 80..159 CDD:238532
PAN_AP_HGF 323..400 CDD:238532 16/97 (16%)
PAN_AP 422..488 CDD:214680 19/120 (16%)
Blue background indicates that the domain is not in the aligned region.

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