DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and cutl-27

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_502252.3 Gene:cutl-27 / 183003 WormBaseID:WBGene00007802 Length:969 Species:Caenorhabditis elegans


Alignment Length:401 Identity:79/401 - (19%)
Similarity:143/401 - (35%) Gaps:104/401 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AQAKGSHKVHCSEDQMRVDIGLPDAESKDQSAP-QIYLEGLKGYPD-------ERCQPQIDGSLA 77
            |:.|.|:|...|...:.:|   |:....:.|.| |:.|.....:.|       .:|.||  |...
 Worm   578 AETKSSNKSSESTSLLPID---PELVGLEDSTPIQLPLNSGIAHVDLSRLSIAAQCLPQ--GINI 637

  Fly    78 VFRLSLSDFYECGVTRMVNQLTGKKVYYHKIIIESTSGKEIVSVKCITTASPAYNVMMNATTGSS 142
            .|.|:.:..| .||.     ...::....::.::::|...|...:      |.:|...||...::
 Worm   638 TFDLTQNTKY-TGVV-----YASERFDQCRVFVKNSSAFSIFIPR------PKHNSWCNAVELNN 690

  Fly   143 STST----SSGGI--HGLVKRDVL----PAGFQEPEDLEITTSLTKRAPEP-----------RLS 186
            ..||    |:..|  |.:..:|.|    ...:...:|.:::..:....|.|           ::|
 Worm   691 EMSTIIIMSNDRILPHDVTTKDDLFYQVSCQYNPNDDAKVSKGIVVGGPSPVMITKKSHIHEKIS 755

  Fly   187 IGVSQDGQK----FTRD---LTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETLIFK 244
            :.:::|||.    |..:   .||||.....:...:|..:..|.|.|         ..:|..||..
 Worm   756 LEITKDGQMVESVFVGESLLATVKSNVSAELLRIVDCTAHRVGGTG---------PPASVNLIAD 811

  Fly   245 GCTVDPYLFENFN-TIDGDILSAKFKAFKFPDSSYVQFRATVNVCLD--KCLGTQCSNNQVGFGR 306
            ||.:.|.:..... |..|  ..:...||:...|..:.....:::|.:  ||....|::.    ..
 Worm   812 GCALLPAIMSPMRLTPSG--WQSSLSAFRIDGSEQIDVVCIISICDENKKCPLMACTSP----AN 870

  Fly   307 RKREISSANKVYEISLAMFLQVQDIEGVNKNEVLQLEEKLRELKLANQRLARNSRGNFAMEQ--- 368
            |:||:.|.::                          |..:|    .::||......|:|..|   
 Worm   871 REREVRSTSE--------------------------ENSIR----VDRRLLVKGDKNYAGSQKFF 905

  Fly   369 TPASAQPAFVV 379
            .|...:|.|.:
 Worm   906 APICIEPFFYI 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 60/306 (20%)
cutl-27NP_502252.3 PAN_1 148..219 CDD:459635
PAN_AP_HGF 235..>287 CDD:238532
PAN_AP_HGF 313..389 CDD:238532
PAN_AP 416..493 CDD:214680
ZP 629..867 CDD:214579 53/262 (20%)
Blue background indicates that the domain is not in the aligned region.

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