DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qsm and ZC449.1

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_508855.1 Gene:ZC449.1 / 180775 WormBaseID:WBGene00022611 Length:454 Species:Caenorhabditis elegans


Alignment Length:352 Identity:59/352 - (16%)
Similarity:109/352 - (30%) Gaps:138/352 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GSHKVHCSEDQMR----VDIGLPD-----AESKDQSAPQIYLEGLKGYPDERCQPQIDGSLAVFR 80
            |.:.:..|.|:.|    .|:..|.     .::|..|:|.:.:|.:    ||..:.::.|..::..
 Worm   130 GKNSLKSSVDKNRNFKISDLPSPTNDQFLQKAKAMSSPMVRMEDM----DEVLRSKLRGEESLVP 190

  Fly    81 LSLSDFYECGVTRMVNQLTGKKVYYHKIIIESTSGKEIVS-----VKCITTASPAYNVMMNATTG 140
            :|..|..|                          |||:..     :||.|  |..|.|::    |
 Worm   191 MSQKDTEE--------------------------GKELDKTENGPLKCKT--SSGYYVVV----G 223

  Fly   141 SSSTSTSSGGIHGLVKRDVLPAGFQEPEDLEITTSLTKRAPEPRLSIGVSQDGQKFTRDLTVKSG 205
            :......|||                  |:::...:.:            .|..|:..:      
 Worm   224 NEIVLPISGG------------------DVQVYNEVEQ------------GDCAKYCSE------ 252

  Fly   206 TPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETLIFKGCTVDPY----LFENFNTIDGDILSA 266
                   |...|.:.:....:||..|      .:.....|...:|:    |.||...|..:    
 Worm   253 -------NKGPDGSTINCRSLNYFPV------EKKCELYGILAEPHGSGKLLENEKVIYAE---- 300

  Fly   267 KFKAFKFPDSSYV-----------------------QFRATVNVCLDKCL-GTQCSNNQVGFGRR 307
               .|..|:|.:|                       :..:::..||.||| ...|.::......:
 Worm   301 ---KFCLPESPFVCQNDEIFILHVQKTLSKRRRITTKAASSITDCLRKCLEQDDCRSSVYISNSK 362

  Fly   308 KREISSANKVYEISLAMFLQVQDIEGV 334
            |.|:.:.    ::|...:.:..|.|.|
 Worm   363 KCELHNV----DVSTGDYARDSDRETV 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 51/309 (17%)
ZC449.1NP_508855.1 PAN_AP 21..105 CDD:214680
PAN_1 230..303 CDD:459635 17/128 (13%)
PAN_1 317..391 CDD:459635 12/73 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.