DRSC/TRiP Functional Genomics Resources

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Protein Alignment qsm and T26C5.2

DIOPT Version :10

Sequence 1:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_495968.3 Gene:T26C5.2 / 174465 WormBaseID:WBGene00012032 Length:595 Species:Caenorhabditis elegans


Alignment Length:412 Identity:72/412 - (17%)
Similarity:134/412 - (32%) Gaps:149/412 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLSMQMWRSLW------LAALFCGLAQAK--------GSHKVHCSEDQMRVDIGLPDA------- 45
            |::::.:.|.|      :..|||..:.::        ..|..|...|: .||..:..|       
 Worm    33 LVNVRPYHSEWRMKTEDMCLLFCAQSASRCRSVVYDTVQHICHYFSDE-GVDQAILSAKMTYLRV 96

  Fly    46 --ESKDQSAPQIYLEGLKGYPD-------------ERCQPQIDGSLAVFRLSLSDFYECGVTRMV 95
              :|..|.:.:|..:.....||             ...|..|...||:.:....:          
 Worm    97 VSQSCLQESSEIASDPKTSPPDAPPTLLPNSFNSINEIQQDIHEELAIPQPPTEE---------- 151

  Fly    96 NQLTGKKVYYHKIIIESTSGKEIVS----VKCITTASP-------AYNVMMNAT----------- 138
            .|:|..:....:::...|:.:|.::    :..:||..|       :.||.::..           
 Worm   152 EQITSTEASIPEVVTFETATQEAMNNDEDLAVVTTEKPFVPPTSTSENVNIDEEDLDAELKSVME 216

  Fly   139 -----TGS---------------SSTSTSSGGIHGLVKRDVLPAGFQEPEDLEITTSLTKRAPEP 183
                 |||               ..||:....::.:.|.||.|:..::..|.::....|:...:.
 Worm   217 QPSQFTGSFADSDAQIDNNGVYRDKTSSEQRWMNSMEKMDVKPSETKKSIDEKLEDLKTENKDKY 281

  Fly   184 RLSIGVSQDG--------QKFTRDLTVKSGTPLTMEINLDEDSA--------------------- 219
            .:.:|.||:.        ||...:|  :.|..:   |..||::|                     
 Worm   282 EMLMGTSQESDPEVAVETQKLKNNL--RYGAKV---IKFDEEAAFRKQSELRRKPVGAKRRPDLK 341

  Fly   220 PVYGLGVNY-------LDVTDTHTSSETLIFKGC---TVDPYL-FENF----NTIDGDILSAKFK 269
            ||.....:|       ||..:....:|.:|...|   .||.:: |||.    .:.:.||      
 Worm   342 PVTISSTSYIQKAKSFLDEVNEEEENENIIETECQQDDVDVWIAFENSAQAEESENVDI------ 400

  Fly   270 AFKFPDSSYVQFRATVNVCLDK 291
                 ||:....|....:|.:|
 Worm   401 -----DSNVPNKRECEKICKEK 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qsmNP_652049.1 ZP 30..298 CDD:214579 65/370 (18%)
T26C5.2NP_495968.3 PAN_1 25..101 CDD:459635 12/68 (18%)
PAN_1 385..459 CDD:459635 10/44 (23%)
PAN_AP_HGF <496..553 CDD:238532
Blue background indicates that the domain is not in the aligned region.

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