| Sequence 1: | NP_005372.2 | Gene: | NCL / 4691 | HGNCID: | 7667 | Length: | 710 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_011092.1 | Gene: | PAB1 / 856912 | SGDID: | S000000967 | Length: | 577 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 374 | Identity: | 94/374 - (25%) |
|---|---|---|---|
| Similarity: | 166/374 - (44%) | Gaps: | 49/374 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Human 286 KQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDL-----AVVDVRIGM 345
Human 346 TRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDEL 409
Human 410 KEVFEDAAEIRLVSK-----DGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 469
Human 470 NQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFA 531
Human 532 SFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSK-----------------TLFVKGL 579
Human 580 SEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 626 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NCL | NP_005372.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..303 | 5/16 (31%) | |
| 8 X 8 AA tandem repeats of X-T-P-X-K-K-X-X | 58..135 | ||||
| RRM1_NCL | 307..381 | CDD:240849 | 18/79 (23%) | ||
| RRM | 379..628 | CDD:223796 | 71/275 (26%) | ||
| RRM2_NCL | 390..465 | CDD:240850 | 21/79 (27%) | ||
| RRM3_NCL | 485..557 | CDD:240851 | 20/74 (27%) | ||
| RRM4_NCL | 572..649 | CDD:240852 | 25/74 (34%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 640..710 | ||||
| PAB1 | NP_011092.1 | PABP-1234 | 38..559 | CDD:130689 | 89/353 (25%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0123 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||