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Protein Alignment NCK1 and Csk
DIOPT Version :10
| Sequence 1: | NP_006144.1 |
Gene: | NCK1 / 4690 |
HGNCID: | 7664 |
Length: | 377 |
Species: | Homo sapiens |
| Sequence 2: | NP_731611.2 |
Gene: | Csk / 41398 |
FlyBaseID: | FBgn0262081 |
Length: | 1052 |
Species: | Drosophila melanogaster |
| Alignment Length: | 115 |
Identity: | 34/115 - (29%) |
| Similarity: | 57/115 - (49%) |
Gaps: | 13/115 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Human 248 TVMQNNPLTSGLEPSPPQ----CDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIR 308
|...|:...|....:|.| |:. |....||::|.:||.:||..|..| .:|.||:|
Fly 653 TTAMNHASLSPTALAPQQGRSRCEV-------KLNAMPWFHGSITRDEAEHLLQPR-EDGLFLVR 709
Human 309 DSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRK-FSTMEELVEHYK 357
:|.:.|.|:::.:..|.|.:|::|:..|....|...: |..:.:||.||:
Fly 710 ESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYE 759
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| NCK1 | NP_006144.1 |
SH3_Nck1_1 |
3..61 |
CDD:212833 |
|
| SH3_Nck1_2 |
108..162 |
CDD:212834 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.