DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NCAM2 and ncam2

DIOPT Version :9

Sequence 1:XP_011527877.1 Gene:NCAM2 / 4685 HGNCID:7657 Length:874 Species:Homo sapiens
Sequence 2:NP_571905.1 Gene:ncam2 / 114441 ZFINID:ZDB-GENE-010822-1 Length:795 Species:Danio rerio


Alignment Length:830 Identity:503/830 - (60%)
Similarity:634/830 - (76%) Gaps:55/830 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    46 LQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANI 110
            |||:|||.|||||||||||||||.||||..::|:|||||:::::.||.:..||:|||||:|||.|
Zfish    20 LQVSISLKKVELSVGESKFFTCTVIGEPVKLEWFNPQGERMVASPRVALHNEGIRSRLTLYNAKI 84

Human   111 EDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY 175
            |||||||||||||:|:|||||||||||||||||:|.|||||:|||.|||||.|:|||.|.|||.|
Zfish    85 EDAGIYRCQATDAQGETQEATVVLEIYQKLTFRDVRSPQEFRQGEVAEVVCDVTSSPVPVVSWFY 149

Human   176 HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQ 240
            :|.|:|..:: :|.:|.|||||:..:.|:|||:||||.|||||||||||:||::|||||.:|:||
Zfish   150 NNIEITEDTE-KFELLQNNNLQVQKVTKADEGVYRCEARVEARGEIDFRNIILVVNVPPVVSVPQ 213

Human   241 KSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYV 305
            :||||||:.||.:||:|||.|||||.::|.|.|..::|:|:|:::...|.||||||...|||.|.
Zfish   214 QSFNATADYGESVTFTCRAYGSPEPDVTWHRKGVQLQESERYVMRARGTTLTVRNIQQDDGGSYT 278

Human   306 CRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 370
            |||:|||||.|.:.||:|||||||.:|:|.|..|.....:.|.|||||:|||:|:||.||.:|::
Zfish   279 CRASNKAGEVEHELFLKVFVQPHITKLRNVTAVEGSAAMISCKAEGEPLPEISWRRASDGHSFSD 343

Human   371 GDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIY 435
            ||||.|||:||:|::|.|.|.|..|||||.||:||||.||||||||||:|||||||||.:|.||:
Zfish   344 GDKSPDGRVEVRGRYGESMLTIVVVKLSDWGRFDCEALSRIGGHQKSMFLDIEYAPKFQANHTIF 408

Human   436 YSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNC 500
            :||||||:||||||.|||||::.|||:||.:|::...|::.|:...:.:||:.|.||.|||||||
Zfish   409 FSWEGNPVNISCDVMSNPPATMLWRREKLTIPSEGAGNMRVYTAPGRSLLEVTPMSDRDFGRYNC 473

Human   501 TATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE 565
            ||.|:||.||||:|||.|||||:||.|::..::|..|.|:|.||||||||||.||.|..|:::|:
Zfish   474 TARNNIGMRFQEFILAQADVPSNPYSVRLSSVAQRVATVTFTKPDSHGGVPISHYLVKYKDISSQ 538

Human   566 IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSS 630
            .||.|:|.|.||:|:|.|||||||||:||:||||||||::|..|.|||||:|||||||:.||...
Zfish   539 DWKDVKSLGTQTIVLLTNLEPNTTYEVRVSAVNGKGQGEFSHTESFQTLPIREPSPPSVQGQRGV 603

Human   631 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAAN 695
            ||:::|.:.||||||.|||||||||:: |||:||:.|.|.|..|.::|:.|||...|||:|||.|
Zfish   604 GKAYRLGLVKQDDGGMPILEYIVKYKT-DKEEQWMTKLVPGVNDFVLLQPLQWNTQYEVEITARN 667

Human   696 RLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCI 760
            ..|.|||||.:||||.||:|..|:||:|||||||:|||:|.|||:||:.||||||:|||||||||
Zfish   668 VKGLSEPTVVKFSMPQKPDITADSLFSGLGLGAVVGLGLAGLLLLLVLVDVSCFFLRQCGLLMCI 732

Human   761 TRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLTEP 825
            ||::|.||:.:|||||||||||||||                                       
Zfish   733 TRKLCSKKTATSGKSKELEEGKAAYL--------------------------------------- 758

Human   826 EYVAWSAHLCSNGKLPLKEEDGKEALNPETIEIKVSND-IIQSKEDDSKA 874
                         |||||||:|||.|.|:|||||:..| .:...::||||
Zfish   759 -------------KLPLKEENGKETLKPDTIEIKLHGDNSLHMTQEDSKA 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCAM2XP_011527877.1 Ig1_NCAM-2 46..137 CDD:143274 67/90 (74%)
I-set 47..136 CDD:254352 65/88 (74%)
I-set 142..218 CDD:254352 46/75 (61%)
IGc2 153..214 CDD:197706 35/60 (58%)
Ig 233..326 CDD:299845 53/92 (58%)
I-set 240..323 CDD:254352 47/82 (57%)
Ig5_NCAM-2 325..422 CDD:143278 60/96 (63%)
IG_like 333..420 CDD:214653 53/86 (62%)
IG_like 438..515 CDD:214653 45/76 (59%)
IGc2 439..507 CDD:197706 38/67 (57%)
FN3 521..613 CDD:238020 55/91 (60%)
fn3 619..703 CDD:278470 48/83 (58%)
ncam2NP_571905.1 Ig1_NCAM-2 20..111 CDD:143274 67/90 (74%)
I-set 21..110 CDD:254352 65/88 (74%)
IGc2 127..187 CDD:197706 35/60 (58%)
Ig 213..299 CDD:299845 49/85 (58%)
I-set 213..296 CDD:254352 47/82 (57%)
Ig 298..395 CDD:299845 60/96 (63%)
I-set 300..393 CDD:254352 57/92 (62%)
IG_like 411..488 CDD:214653 45/76 (59%)
IGc2 412..480 CDD:197706 38/67 (57%)
FN3 494..586 CDD:238020 55/91 (60%)
fn3 <616..675 CDD:278470 35/59 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194343429
Domainoid 1 1.000 146 1.000 Domainoid score I18422
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3336
Inparanoid 1 1.050 1060 1.000 Inparanoid score I2049
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48678
OrthoDB 1 1.010 - - D129648at2759
OrthoFinder 1 1.000 - - FOG0002001
OrthoInspector 1 1.000 - - otm27991
orthoMCL 1 0.900 - - OOG6_103800
Panther 1 1.100 - - LDO PTHR12231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4566
SonicParanoid 1 1.000 - - X1676
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1616.440

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