Sequence 1: | NP_001229536.1 | Gene: | NCAM1 / 4684 | HGNCID: | 7656 | Length: | 884 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
Alignment Length: | 827 | Identity: | 192/827 - (23%) |
---|---|---|---|
Similarity: | 285/827 - (34%) | Gaps: | 203/827 - (24%) |
- Green bases have known domain annotations that are detailed below.
Human 39 FLCQVAGDAKDKDISWFSPNGEKLTPNQQRISVVWNDDSSSTL-----------TIYNANIDDAG 92
Human 93 IYKCVVTGEDG--SESEATVNVKIFQKLMFKNAPTPQEFREGEDAVIVCDVVSSLP-PTIIWKHK 154
Human 155 GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPT------ 213
Human 214 ---IQARQNIV----NATANLGQSVTLVCDAEGFPEPTMSW--TKDGEQIEQEEDDEKYIFSDDS 269
Human 270 SQLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEASGD 334
Human 335 PIPSITWRTSTRNISSEEKASWTRPEKQEVHAPWNWQVGRQKGQAGSAGFPGSHETLDGHM-VVR 398
Human 399 SHARVSSLTLKSIQYTDAGEYI-CTASNTIGQDSQ----SMYLEVQYAPKL--QGPVAVYTWEGN 456
Human 457 Q-------VNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTP-DSENDFGNY 513
Human 514 NCTAVNRIGQESLEFILVQADTPSSPSI------------------DQVEPYSSTAQVQFDEPEA 560
Human 561 TGGVPILKYKAE---------WRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 616
Human 617 GKGLGEISAASE--------FKTQPVQGEPSAPKLEGQMGEDGN-----SIKVNLIKQDDGGSPI 668
Human 669 RHYLVRYRALSSEWKPEIRLP---SGSDHVMLKSLDWNAEYEVYVVA-----------------E 713
Human 714 NQQGKSKAAHFVFRTSAQPTAIPANGSPTSGLSTGAIVGILIVIFVL 760 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NCAM1 | NP_001229536.1 | Ig1_NCAM-1 | 20..115 | CDD:143273 | 22/88 (25%) |
IG | 124..190 | CDD:214652 | 17/66 (26%) | ||
Ig | 211..307 | CDD:325142 | 30/110 (27%) | ||
Ig | 306..438 | CDD:325142 | 30/137 (22%) | ||
Ig_3 | 447..519 | CDD:316449 | 19/79 (24%) | ||
FN3 | 534..631 | CDD:238020 | 29/131 (22%) | ||
fn3 | 639..720 | CDD:306538 | 21/105 (20%) | ||
Trypan_PARP | <792..>864 | CDD:330686 | |||
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 22/87 (25%) |
I-set | 91..184 | CDD:254352 | 21/85 (25%) | ||
I-set | 190..279 | CDD:254352 | 23/104 (22%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 22/101 (22%) | ||
I-set | 283..370 | CDD:254352 | 27/91 (30%) | ||
Ig | 300..370 | CDD:299845 | 22/74 (30%) | ||
Ig | 388..>457 | CDD:299845 | 22/104 (21%) | ||
I-set | 479..561 | CDD:254352 | 24/91 (26%) | ||
Ig | 496..561 | CDD:143165 | 18/67 (27%) | ||
FN3 | 588..681 | CDD:238020 | 23/104 (22%) | ||
FN3 | <817..856 | CDD:238020 | 6/22 (27%) | ||
fn3 | 864..952 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |