DRSC/TRiP Functional Genomics Resources

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Protein Alignment NCAM1 and babos

DIOPT Version :9

Sequence 1:NP_001229536.1 Gene:NCAM1 / 4684 HGNCID:7656 Length:884 Species:Homo sapiens
Sequence 2:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster


Alignment Length:121 Identity:32/121 - (26%)
Similarity:49/121 - (40%) Gaps:40/121 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   121 KNAPTPQEFR------------------EGEDAVIVCDVVSSLPPT---IIWKHKGRDVILKKDV 164
            ::||:||...                  .|||.|:.|||.|:|..:   ::| :.|.:||  .:.
  Fly    47 QSAPSPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDVVVLW-YFGDNVI--SNG 108

Human   165 RFIVLSN-----NY-LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTI 214
            :.:|..|     || |.|........|:|.|  ::|..|.        :||...||
  Fly   109 KNLVQPNFKLDANYDLTILKASPQVAGSYLC--KVLPSGS--------VVNTKVTI 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCAM1NP_001229536.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 24/92 (26%)
Ig 211..307 CDD:325142 2/4 (50%)
Ig 306..438 CDD:325142
Ig_3 447..519 CDD:316449
FN3 534..631 CDD:238020
fn3 639..720 CDD:306538
Trypan_PARP <792..>864 CDD:330686
babosNP_001286719.1 ig 70..154 CDD:278476 26/96 (27%)
IG_like 70..154 CDD:214653 26/96 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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