DRSC/TRiP Functional Genomics Resources

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Protein Alignment NCAM1 and dpr18

DIOPT Version :9

Sequence 1:NP_001229536.1 Gene:NCAM1 / 4684 HGNCID:7656 Length:884 Species:Homo sapiens
Sequence 2:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster


Alignment Length:277 Identity:61/277 - (22%)
Similarity:101/277 - (36%) Gaps:99/277 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    41 CQVAGDAKDKDISWFSPNGEKLT---------PNQQRISVVWNDDSSSTLTIYNANIDDAGIYKC 96
            |:| |..|||.:.|.....||::         ....||.|.:...::..|.|.....:|||:|.|
  Fly   246 CRV-GMLKDKTVMWVRRTAEKVSLLTVGNVTYSGDPRIRVKFQYPNNWRLLINPTQTEDAGVYMC 309

Human    97 VVT----------------------------GEDGSESEATVNVK------IFQK---LMFKNAP 124
            .|:                            |:...:|.:||:::      .|||   .:.|:..
  Fly   310 QVSTHPPRVFTTNLTVL
EPPLRIIDEHERDVGDRYYKSGSTVDLQCQISRSFFQKERQTILKSTD 374

Human   125 TPQEFREGEDAV--IVCDVVSSLPPTII-----WKHK--GRDVILKKDVRFIV----------LS 170
            :      ..|||  ::.:..|.|  .:|     .:||  |:| :.|...:||.          ::
  Fly   375 S------ANDAVQKLINETTSEL--NLIGNVNQTQHKFSGQD-LEKYFTKFITWAKDEEPLQGMT 430

Human   171 NNYLQIRGI-----------KKTDEGTYRCE-GRILARGEINFKDIQVIV-NVPPTIQARQNIVN 222
            |..|.:..:           |.:|.|.|.|. ||:..    ....:||:. .:|..:|  .||.:
  Fly   431 NRRLSVSDVWLTSRISIGDAKLSDSGNYSCSLGRLFT----VIVQVQVLTGELPAAVQ--HNIGS 489

Human   223 AT-----ANLGQSVTLV 234
            .|     |.||..:.|:
  Fly   490 RTEIYSLAMLGHLLVLI 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCAM1NP_001229536.1 Ig1_NCAM-1 20..115 CDD:143273 24/116 (21%)
IG 124..190 CDD:214652 19/95 (20%)
Ig 211..307 CDD:325142 9/29 (31%)
Ig 306..438 CDD:325142
Ig_3 447..519 CDD:316449
FN3 534..631 CDD:238020
fn3 639..720 CDD:306538
Trypan_PARP <792..>864 CDD:330686
dpr18NP_573102.1 IG_like 242..325 CDD:214653 20/79 (25%)
Ig <258..326 CDD:299845 14/67 (21%)
IGc2 <417..461 CDD:197706 7/43 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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