DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and NFC5

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_194702.2 Gene:NFC5 / 829094 AraportID:AT4G29730 Length:487 Species:Arabidopsis thaliana


Alignment Length:371 Identity:90/371 - (24%)
Similarity:151/371 - (40%) Gaps:67/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 KMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVK------HQGCVNRVRARRLGNS 174
            |...|:.::..:|.....|.....:..:|:..:|..  ...||      |.|.|||:| ....||
plant    96 KTQRLYLSEQTNGSVPNTLVIANCETVN
RQLNEKAH--SPFVKKYKTIIHPGEVNRIR-ELPQNS 157

  Fly   175 VYAASWSELGRVNIWDL-TQP-LQAVENAQLAKQYEQSEARPVFTFGGHQQEG-FAIDWSPSADG 236
            ...|:.::...:.||:. ||| ..||..|        .::||.....|||.:. ||:...|:...
plant   158 KIVATHTDSPDILIWNTETQPDRYAVLGA--------PDSRPDLLLIGHQDDAEFALAMCPTEPF 214

  Fly   237 VLATGDCRRDIHVWTPVED--------------------------GTWKVDQRPL-AGHSQSVED 274
            ||:.|. .:.:.:|. ::|                          |...|..|.: .||..:|||
plant   215 VLSGGK-DKSVILWN-IQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVED 277

  Fly   275 LQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGDDG 338
            :.:.|:......|...|..:.:||.|.....|  :..|.||.:|::.:.|| .:...|.:|..|.
plant   278 VAFCPSSAQEFCSVGDDSCLMLWDARTGTSPA--MKVEKAHDADLHCVDWNPHDNNLILTGSADN 340

  Fly   339 YLHIWDLRQFQSK---KPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDL-AVEKDIDQ 399
            .:.::|.|...|.   .|:..|:.|...:..|:|||.:::|..|..:|..:.:||. .|.|..::
plant   341 TVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSER 405

  Fly   400 AVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHPQLPGVLLSTA 444
            |          .|.|..|.|.|.|.:: :.:.||....|..::|.:
plant   406 A----------TKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVS 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 1/3 (33%)
WD40 152..>395 CDD:295369 72/283 (25%)
WD40 <172..>447 CDD:225201 76/309 (25%)
WD40 repeat 226..267 CDD:293791 11/67 (16%)
WD40 repeat 272..312 CDD:293791 10/39 (26%)
WD40 repeat 320..357 CDD:293791 9/40 (23%)
NFC5NP_194702.2 CAF1C_H4-bd 56..123 CDD:372002 4/26 (15%)
WD40 143..395 CDD:392136 67/264 (25%)
WD40 repeat 148..197 CDD:293791 16/57 (28%)
WD40 repeat 202..269 CDD:293791 11/68 (16%)
WD40 repeat 276..314 CDD:293791 9/39 (23%)
WD40 repeat 320..363 CDD:293791 9/42 (21%)
WD40 362..>484 CDD:392136 24/90 (27%)
WD40 repeat 369..418 CDD:293791 16/58 (28%)
WD40 repeat 424..456 CDD:293791 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D831322at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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