DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and FVE

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_565456.2 Gene:FVE / 816471 AraportID:AT2G19520 Length:507 Species:Arabidopsis thaliana


Alignment Length:400 Identity:101/400 - (25%)
Similarity:162/400 - (40%) Gaps:91/400 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 GTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCA---------- 155
            |.|..:|...|     ...|:.::..||.....|      |....|:.||::..|          
plant    97 GPQLEQATYKN-----RQRLYLSEQTDGSVPNTL------VIANCEVVK
PRVAAAEHISQFNEEA 150

  Fly   156 ---LVK------HQGCVNRVRARRLGNSVYAASWSELGRVNIWDL-TQP-LQAVENAQLAKQYEQ 209
               .||      |.|.|||:| ....||...|:.::...|.|||: ||| ..||..|        
plant   151 RSPFVKKYKTIIHPGEVNRIR-ELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGA-------- 206

  Fly   210 SEARPVFTFGGHQQEG-FAIDWSPSADGVLATGDCRRDIHVWTPVED------------------ 255
            :.:||.....|||... ||:...|:...||:.|. .:.:.:|: ::|                  
plant   207 ANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK-DKSVVLWS-IQDHITTIGTDSKSSGSIIKQ 269

  Fly   256 ---GTWKVDQRPLA-------GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLT 310
               ||.| ::.|..       ||..:|||:.:||.......|...|..:.:||.|........: 
plant   270 TGEGTDK-NESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKV- 332

  Fly   311 CEDAHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSK---KPIATFKHHTDHITTVEWSP 371
             |.||.:|::.:.|| .::..|.:|..|..:.::|.|:..:.   .||..|:.|...:..|:|||
plant   333 -EKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP 396

  Fly   372 AEATVLASGGDDDQIALWDL-AVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHP 434
            .:::|..|..:|..:.:||. .|.|..|:|.          |.|..|.|.|.|.:: :.:.||:.
plant   397 DKSSVFGSSAEDGLLNIWDYDRVSKKSDRAA----------KSPAGLFFQHAGHRDKVVDFHWNA 451

  Fly   435 QLPGVLLSTA 444
            ..|..::|.:
plant   452 SDPWTIVSVS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 4/18 (22%)
WD40 152..>395 CDD:295369 76/297 (26%)
WD40 <172..>447 CDD:225201 80/309 (26%)
WD40 repeat 226..267 CDD:293791 12/68 (18%)
WD40 repeat 272..312 CDD:293791 10/39 (26%)
WD40 repeat 320..357 CDD:293791 9/40 (23%)
FVENP_565456.2 CAF1C_H4-bd 66..134 CDD:403473 10/47 (21%)
WD40 163..477 CDD:421866 86/322 (27%)
WD40 repeat 168..217 CDD:293791 18/57 (32%)
WD40 repeat 222..289 CDD:293791 12/69 (17%)
WD40 repeat 296..333 CDD:293791 9/38 (24%)
WD40 repeat 340..383 CDD:293791 9/42 (21%)
WD40 repeat 389..438 CDD:293791 17/58 (29%)
WD40 repeat 444..476 CDD:293791 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D831322at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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