DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)09851 and Wdr59

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_038954178.1 Gene:Wdr59 / 690751 RGDID:1592213 Length:1003 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068
WD40 152..>395 CDD:295369
WD40 <172..>447 CDD:225201
WD40 repeat 226..267 CDD:293791
WD40 repeat 272..312 CDD:293791
WD40 repeat 320..357 CDD:293791
Wdr59XP_038954178.1 WD40 <34..314 CDD:225201
WD40 repeat 62..103 CDD:293791
WD40 repeat 109..150 CDD:293791
WD40 repeat 154..188 CDD:293791
WD40 repeat 195..229 CDD:293791
WD40 repeat 237..279 CDD:293791
WD40 repeat 285..316 CDD:293791
RWD 401..501 CDD:214735
mRING-H2-C3H3C2_WDR59 951..997 CDD:319606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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