DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and RBBP7

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001185648.1 Gene:RBBP7 / 5931 HGNCID:9890 Length:469 Species:Homo sapiens


Alignment Length:445 Identity:122/445 - (27%)
Similarity:197/445 - (44%) Gaps:77/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DDTAEPKAPKEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTA 96
            :||.|.:...|.|....|   :...:.|   .||.|....  |.|:...:|:......:.:.: .
Human    52 EDTVEERVINEEYKIWKK---NTPFLYD---LVMTHALQW--PSLTVQWLPEVTKPEGKDYAL-H 107

  Fly    97 YIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDD------VTDREELKKPQMTCA 155
            ::|.||..|... |:|:|   :.:|...|:...:....:.|:.:      ||.:.|       |.
Human   108 WLVLGTHTSDEQ-NHLVV---ARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE-------CE 161

  Fly   156 L-VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFG 219
            : :.|:|.|||.|.......:.|.. :....|.::|.|:        ..||.....|..|.....
Human   162 IKINHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTK--------HPAKPDPSGECNPDLRLR 217

  Fly   220 GHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGT---WKVDQRP-----------LAGHSQ 270
            |||:||:.:.|:.:..|           |:.:..:|.|   |.::..|           ..|||.
Human   218 GHQKEGYGLSWNSNLSG-----------HLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 271

  Fly   271 SVEDLQWSPNERSVLASCSVDKTIRIWDCRA-SPQKACMLTCEDAHQSDVNVISWNRNEPFI-AS 333
            .|||:.|.....|:..|.:.|:.:.|||.|: :..|...|.  |||.::||.:|:|....|| |:
Human   272 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV--DAHTAEVNCLSFNPYSEFILAT 334

  Fly   334 GGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDID 398
            |..|..:.:||||..:.|  :.||:.|.|.|..|.|||...|:|||.|.|.::.:|||:...: :
Human   335 GSADKTVALWDLRNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE-E 396

  Fly   399 QAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTAHSGFNIFR 452
            |:.:.|::.      ||:|||||.|. .:|.:..|:|..|.|:.|.:..  ||.:
Human   397 QSAEDAEDG------PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQ 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 14/66 (21%)
WD40 152..>395 CDD:295369 78/259 (30%)
WD40 <172..>447 CDD:225201 87/291 (30%)
WD40 repeat 226..267 CDD:293791 7/54 (13%)
WD40 repeat 272..312 CDD:293791 13/40 (33%)
WD40 repeat 320..357 CDD:293791 13/37 (35%)
RBBP7NP_001185648.1 CAF1C_H4-bd 62..131 CDD:372002 18/81 (22%)
WD40 166..446 CDD:392136 95/311 (31%)
WD40 repeat 171..218 CDD:293791 11/55 (20%)
WD40 repeat 223..267 CDD:293791 8/54 (15%)
WD40 repeat 274..308 CDD:293791 10/33 (30%)
WD40 repeat 319..357 CDD:293791 15/39 (38%)
WD40 repeat 363..414 CDD:293791 22/57 (39%)
WD40 repeat 420..445 CDD:293791 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D831322at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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