DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and wdr17

DIOPT Version :10

Sequence 1:NP_610182.3 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_009290943.1 Gene:wdr17 / 561804 ZFINID:ZDB-GENE-090313-131 Length:1309 Species:Danio rerio


Alignment Length:602 Identity:122/602 - (20%)
Similarity:193/602 - (32%) Gaps:201/602 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGNENI-------SMEVVEPEDAESDMSSDSGSDAEDD-TAEPKAPKEV-YL------PGTKLAD 52
            ||:.:|       ...|:.||..|       |:|.||. ||....|... ||      .|.:|.|
Zfish   188 DGSLSIFQPGSKHQKHVLRPESLE-------GTDEEDPITALEWDPLSTDYLLVANMHNGIRLLD 245

  Fly    53 DEELVCDESAYVMLHQASTGAPCLSFDVIPDELG---------------SGRQSFPMTAYIVAGT 102
            .|.|.|..:  .....|:....||::  :|...|               :..::.|:..:.:..|
Zfish   246 SESLCCITT--FSFPSAAASVQCLAW--VPSAPGMFITGDSQVGVLRIWNVSRATPLDNFKLKKT 306

  Fly   103 QASRAHVNNLIVMKMS--------NLHKTQDNDGDEDEELEDDQ--------------------- 138
            .....||.|....|.|        |.:.:..::......|..:|                     
Zfish   307 GFHALHVLNSPPAKKSFSSNSPSKNHYTSSTSEAVPPPTLSQNQAFSLPPGHAVCCFMDGGVGLY 371

  Fly   139 -------DDVTDREELK-------KPQ--MTCALVKHQGC-----VNRVRA--RRLGNS--VYAA 178
                   |.:.|...::       ||.  ...|.....|.     :|.:.|  ...||.  ||:.
Zfish   372 DMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVVYSL 436

  Fly   179 SWSELGRVN------------IWDLTQ--------PLQAVENAQLAKQYEQSEARPVFTFGG--- 220
            ||:. |.:|            |||:.:        .||..:|......:...:::.:.|..|   
Zfish   437 SWAP-GDLNCIAGATSRNGAFIWDVKKGKMITRFNELQHGKNGIFCVAWSHKDSKRIATCSGDGF 500

  Fly   221 ---------------HQQEGFAIDWSPSADGVLATGDCRRDIHVW--TPVEDGTWKVDQRPLAGH 268
                           |....|..|||.:...::|||...:::.|:  ....|...||    ..||
Zfish   501 CIIRTIDGKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKV----FTGH 561

  Fly   269 SQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFIAS 333
            :..|..::|||....:|.|.|.|.|:||||   ..|.|| :.....|.:.|..:.||...|::.:
Zfish   562 TAKVFHVRWSPLREGILCSGSDDGTVRIWD---YTQDAC-INVLSGHTAPVRGLMWNTEVPYLLT 622

  Fly   334 GGDDGY-LHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLA----- 392
            .|...| :.:||.|....   :.|...|...:..:...|:....:||...|..:.||.|.     
Zfish   623 SGSWDYTIRVWDTRDGTC---LDTVYDHGADVYGLTCHPSRPFTMASCSRDSTVRLWSLTPLIAP 684

  Fly   393 ---------------------------------VEKDIDQAVDPAQNEDVLNKL--------PP- 415
                                             |.:||.|.:|...::..:.||        || 
Zfish   685 LVVNILTDHSWDDIIGNTDRAMVPGAPPLLCGKVSRDIKQELDKLSSDVRMKKLRWFSECFSPPG 749

  Fly   416 ------QLLFIHQGQKE 426
                  .|:.:..||.:
Zfish   750 GSHNLWDLVAVINGQDD 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_610182.3 CAF1C_H4-bd 53..121 CDD:463513 16/90 (18%)
WD40 <156..392 CDD:441893 67/285 (24%)
WD40 repeat 226..267 CDD:293791 11/42 (26%)
WD40 repeat 272..312 CDD:293791 16/39 (41%)
WD40 repeat 320..357 CDD:293791 8/37 (22%)
wdr17XP_009290943.1 WD40 <67..293 CDD:441893 27/115 (23%)
WD40 repeat 80..117 CDD:293791
WD40 repeat 122..159 CDD:293791
WD40 repeat 167..211 CDD:293791 6/22 (27%)
WD40 repeat 219..256 CDD:293791 11/38 (29%)
WD40 repeat 264..328 CDD:293791 11/65 (17%)
WD40 <351..679 CDD:441893 72/339 (21%)
WD40 repeat 351..385 CDD:293791 2/33 (6%)
WD40 repeat 390..428 CDD:293791 6/37 (16%)
WD40 repeat 434..474 CDD:293791 9/40 (23%)
WD40 repeat 479..514 CDD:293791 2/34 (6%)
WD40 repeat 521..559 CDD:293791 11/41 (27%)
WD40 repeat 565..602 CDD:293791 16/40 (40%)
WD40 repeat 608..645 CDD:293791 10/39 (26%)
WD40 repeat 651..676 CDD:293791 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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