DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and SPBC1711.07

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_595880.1 Gene:SPBC1711.07 / 2539693 PomBaseID:SPBC1711.07 Length:480 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:193/475 - (40%)
Similarity:285/475 - (60%) Gaps:46/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENISMEVVEPEDA------------ESDMSSDSGSDAED-DTAEP-KAPKEVYLPGTKLADDEEL 56
            :|:..|:.|.|||            |:|...|:|.|.|: :.|:| |.|   :|||.|:..||:|
pombe    26 DNVDTEMGEFEDAYEDEIESEEEYIEADGEKDNGMDEEEQNDAQPSKIP---WLPGGKINADEKL 87

  Fly    57 VCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLH 121
            |.|.|.|.|||......|.||||::.|.||..|:::|...|:|.|:||..::.|.|.|||:|.|:
pombe    88 VADPSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQLY 152

  Fly   122 KTQDNDGDEDEELEDDQDDVTDREELKK-PQMTCALVKHQGCVNRVR-ARRLGNS---VYAASWS 181
            |||          .|:.||.:|..:::: |.:....:..:|..|||| |||..||   ...||:.
pombe   153 KTQ----------HDENDDASDNSDVEEDPILEHKSISTKGACNRVRSARRPANSSKESLLASFH 207

  Fly   182 ELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRD 246
            |.|:|:|||:...|:::::..:  ...:.|..|::|...|:.||:|:||||....:| :||...:
pombe   208 ETGKVHIWDIAPHLRSLDSPGV--MVSRKENSPLYTVNRHKTEGYALDWSPFEYSLL-SGDNANE 269

  Fly   247 IHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTC 311
            |.: |...:|.|:.|..|...|:.:||||||||:|::|.:|||.|.|.||||.| :.||...||.
pombe   270 IFL-TKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVR-NKQKTSALTV 332

  Fly   312 EDAHQS-DVNVISWNRNEP-FIASGGDDGYLHIWDLRQFQSKK----PIATFKHHTDHITTVEWS 370
             :||.. ||||:|||...| .:|:|.|:|...:||||..:|..    |:|:||.|...|.::||.
pombe   333 -NAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWH 396

  Fly   371 PAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQ 435
            |.|.:|:...|.|:||:||||:||  :|:....::..:.|..:||||:|||.||:||||:|||.|
pombe   397 PNEDSVIGVVGADNQISLWDLSVE--LDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQ 459

  Fly   436 LPGVLLSTAHSGFNIFRTIS 455
            :||.::|||.:|.|:|:||:
pombe   460 IPGTIVSTAMTGINVFKTIT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 31/66 (47%)
WD40 152..>395 CDD:295369 103/252 (41%)
WD40 <172..>447 CDD:225201 120/283 (42%)
WD40 repeat 226..267 CDD:293791 14/40 (35%)
WD40 repeat 272..312 CDD:293791 24/39 (62%)
WD40 repeat 320..357 CDD:293791 17/41 (41%)
SPBC1711.07NP_595880.1 CAF1C_H4-bd 84..151 CDD:289068 31/66 (47%)
WD40 <188..>418 CDD:225201 98/235 (42%)
WD40 repeat 195..244 CDD:293791 14/50 (28%)
WD40 210..>418 CDD:295369 88/213 (41%)
WD40 repeat 250..289 CDD:293791 14/40 (35%)
WD40 repeat 294..333 CDD:293791 24/40 (60%)
WD40 repeat 341..377 CDD:293791 15/35 (43%)
WD40 repeat 451..475 CDD:293791 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 74 1.000 Domainoid score I2524
eggNOG 1 0.900 - - E1_KOG0302
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6644
Inparanoid 1 1.050 328 1.000 Inparanoid score I523
OMA 1 1.010 - - QHG53774
OrthoFinder 1 1.000 - - FOG0005244
OrthoInspector 1 1.000 - - oto101814
orthoMCL 1 0.900 - - OOG6_102504
Panther 1 1.100 - - LDO PTHR45903
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1211
SonicParanoid 1 1.000 - - X3761
TreeFam 1 0.960 - -
1413.860

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