DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and Rbbp7

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_033057.3 Gene:Rbbp7 / 245688 MGIID:1194910 Length:425 Species:Mus musculus


Alignment Length:445 Identity:122/445 - (27%)
Similarity:197/445 - (44%) Gaps:77/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DDTAEPKAPKEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTA 96
            :||.|.:...|.|....|   :...:.|   .||.|....  |.|:...:|:......:.:.: .
Mouse     8 EDTVEERVINEEYKIWKK---NTPFLYD---LVMTHALQW--PSLTVQWLPEVTKPEGKDYAL-H 63

  Fly    97 YIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDD------VTDREELKKPQMTCA 155
            ::|.||..|... |:|:|   :.:|...|:...:....:.|:.:      ||.:.|       |.
Mouse    64 WLVLGTHTSDEQ-NHLVV---ARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE-------CE 117

  Fly   156 L-VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFG 219
            : :.|:|.|||.|.......:.|.. :....|.::|.|:        ..||.....|..|.....
Mouse   118 IKINHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTK--------HPAKPDPSGECNPDLRLR 173

  Fly   220 GHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGT---WKVDQRP-----------LAGHSQ 270
            |||:||:.:.|:.:..|           |:.:..:|.|   |.::..|           ..|||.
Mouse   174 GHQKEGYGLSWNSNLSG-----------HLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227

  Fly   271 SVEDLQWSPNERSVLASCSVDKTIRIWDCRA-SPQKACMLTCEDAHQSDVNVISWNRNEPFI-AS 333
            .|||:.|.....|:..|.:.|:.:.|||.|: :..|...|.  |||.::||.:|:|....|| |:
Mouse   228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV--DAHTAEVNCLSFNPYSEFILAT 290

  Fly   334 GGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDID 398
            |..|..:.:||||..:.|  :.||:.|.|.|..|.|||...|:|||.|.|.::.:|||:...: :
Mouse   291 GSADKTVALWDLRNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE-E 352

  Fly   399 QAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTAHSGFNIFR 452
            |:.:.|::.      ||:|||||.|. .:|.:..|:|..|.|:.|.:..  ||.:
Mouse   353 QSAEDAEDG------PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQ 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 14/66 (21%)
WD40 152..>395 CDD:295369 78/259 (30%)
WD40 <172..>447 CDD:225201 87/291 (30%)
WD40 repeat 226..267 CDD:293791 7/54 (13%)
WD40 repeat 272..312 CDD:293791 13/40 (33%)
WD40 repeat 320..357 CDD:293791 13/37 (35%)
Rbbp7NP_033057.3 CAF1C_H4-bd 18..87 CDD:403473 18/81 (22%)
WD 1 47..122 15/86 (17%)
WD40 122..402 CDD:421866 95/311 (31%)
WD40 repeat 127..174 CDD:293791 11/55 (20%)
WD 2 128..173 10/53 (19%)
WD40 repeat 179..223 CDD:293791 8/54 (15%)
WD 3 181..217 7/46 (15%)
WD 4 228..269 13/42 (31%)
WD40 repeat 230..264 CDD:293791 10/33 (30%)
WD40 repeat 275..313 CDD:293791 15/39 (38%)
WD 5 275..312 14/38 (37%)
WD 6 318..369 21/57 (37%)
WD40 repeat 319..370 CDD:293791 22/57 (39%)
WD 7 376..403 8/26 (31%)
WD40 repeat 376..401 CDD:293791 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D831322at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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