DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and Y54H5A.1

DIOPT Version :9

Sequence 1:NP_001260713.1 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_498091.1 Gene:Y54H5A.1 / 175701 WormBaseID:WBGene00021899 Length:453 Species:Caenorhabditis elegans


Alignment Length:462 Identity:198/462 - (42%)
Similarity:281/462 - (60%) Gaps:20/462 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GNENISMEVVEPEDAESDMSSDSGSDAEDDTAE-PKAPKEVYLPGTK--LADDEELVCDESAYVM 65
            |..::.|...:|.: :.|.|.:...:.:|:..| |:..::.|:||..  |...|||..|.|||.:
 Worm     3 GENDVEMHDEDPVE-DIDESEEEVDETDDEDEEVPENQRQAYIPGLSRPLKKGEELDFDPSAYKL 66

  Fly    66 LHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNL---HKTQDND 127
            .|..::..|||||||:.|.||..|..||...|||:||||.:...|.:|||.:.||   .|.::|.
 Worm    67 FHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEKENK 131

  Fly   128 GDEDEELEDDQDDVTDREELKK--PQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWD 190
            ||:.:..||:.:| .|.||.||  |:|....:.|.|.:||:|:.|||:|...|.||:.|||.:|:
 Worm   132 GDDSDTSEDESED-EDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWN 195

  Fly   191 LTQPLQAVENAQLAKQYE-QSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVE 254
            :|..|..........:.| |...||:||..|..:||:.:.||....|.|||||..:.|::|...|
 Worm   196 ITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKE 260

  Fly   255 DGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDV 319
            .|.|.|...||.||.:|||||.|||.|..:|||||.|.:|::||.|::|:.||:.|.:.||:|||
 Worm   261 GGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDV 325

  Fly   320 NVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDD 384
            |||||||:|..|.||||||.|.||.|:..|..:|:|.||:|...||:|:|.|.|.|...:.|:||
 Worm   326 NVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDD 390

  Fly   385 QIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFN 449
            |..:||:|.|.|         .:..:..:||||:|:|.||.|:||:|||.|:||:.::|:..|||
 Worm   391 QTTIWDIATEAD---------GQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSIDGFN 446

  Fly   450 IFRTISV 456
            :|:||::
 Worm   447 VFKTINI 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_001260713.1 CAF1C_H4-bd 53..120 CDD:289068 32/66 (48%)
WD40 152..>395 CDD:295369 113/243 (47%)
WD40 <172..>447 CDD:225201 125/275 (45%)
WD40 repeat 226..267 CDD:293791 16/40 (40%)
WD40 repeat 272..312 CDD:293791 22/39 (56%)
WD40 repeat 320..357 CDD:293791 22/36 (61%)
Y54H5A.1NP_498091.1 CAF1C_H4-bd 54..122 CDD:372002 33/67 (49%)
WD40 182..>401 CDD:392136 103/218 (47%)
WD40 repeat 232..273 CDD:293791 16/40 (40%)
WD40 repeat 278..318 CDD:293791 22/39 (56%)
WD40 repeat 326..364 CDD:293791 22/37 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167353
Domainoid 1 1.000 104 1.000 Domainoid score I4223
eggNOG 1 0.900 - - E1_KOG0302
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6644
Inparanoid 1 1.050 396 1.000 Inparanoid score I1114
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53774
OrthoDB 1 1.010 - - D414254at33208
OrthoFinder 1 1.000 - - FOG0005244
OrthoInspector 1 1.000 - - oto20114
orthoMCL 1 0.900 - - OOG6_102504
Panther 1 1.100 - - LDO PTHR45903
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1211
SonicParanoid 1 1.000 - - X3761
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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