DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)09851 and Grwd1

DIOPT Version :10

Sequence 1:NP_610182.3 Gene:l(2)09851 / 46662 FlyBaseID:FBgn0022288 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_700468.2 Gene:Grwd1 / 101612 MGIID:2141989 Length:446 Species:Mus musculus


Alignment Length:52 Identity:15/52 - (28%)
Similarity:24/52 - (46%) Gaps:10/52 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 LQNPLSPVFS------LQPLQAIHA-RANSDIQAEDELQPKFQAQIVSSLAP 227
            ::..|||.|:      :.|:...|| |...::|..|..||   .:|...:||
Mouse   130 IRGTLSPYFTSGRLKEIFPIAMTHADRFIKNMQKRDHEQP---VKIKEVVAP 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)09851NP_610182.3 CAF1C_H4-bd 53..121 CDD:463513
WD40 <156..392 CDD:441893 15/52 (29%)
WD40 repeat 226..267 CDD:293791 2/2 (100%)
WD40 repeat 272..312 CDD:293791
WD40 repeat 320..357 CDD:293791
Grwd1NP_700468.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
CAF1C_H4-bd 44..112 CDD:463513
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..141 4/10 (40%)
WD40 repeat 175..212 CDD:293791 2/4 (50%)
WD40 206..>384 CDD:475233
WD 1 212..252
WD40 repeat 218..259 CDD:293791
WD 2 259..299
WD40 repeat 265..306 CDD:293791
WD 3 306..345
WD40 repeat 311..350 CDD:293791
WD 4 351..391
WD 5 412..445
Blue background indicates that the domain is not in the aligned region.

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