DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYOC and Myoc

DIOPT Version :10

Sequence 1:NP_000252.1 Gene:MYOC / 4653 HGNCID:7610 Length:504 Species:Homo sapiens
Sequence 2:NP_110492.2 Gene:Myoc / 81523 RGDID:620430 Length:502 Species:Rattus norvegicus


Alignment Length:500 Identity:406/500 - (81%)
Similarity:448/500 - (89%) Gaps:1/500 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 CARCCSFGPEMPAVQLLLLACLVWDVGARTAQLRKANDQSGRCQYTFSVASPNESSCPEQSQAMS 69
            ||.|||.||:|||:|||.||||||.:||||||.|||||:||||||||:||||:|||||.:.||||
  Rat     4 CAYCCSCGPKMPALQLLFLACLVWGMGARTAQFRKANDRSGRCQYTFTVASPSESSCPREDQAMS 68

Human    70 VIHNLQRDSSTQRLDLEATKARLSSLESLLHQLTLDQAARPQETQEGLQRELGTLRRERDQLETQ 134
            .|.:||||||.|..|||:||||:.||||||||:|.......||.|||||.:||.|||||||||||
  Rat    69 AIQDLQRDSSIQHADLESTKARVRSLESLLHQMTSGGVTGTQEVQEGLQGQLGALRRERDQLETQ 133

Human   135 TRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSSQEVARLRRGQCPQTRDTARAVPPGS 199
            ||:||.||:|||||||.|||||::|.|||::||||||.||||||||||||||.|...::.:.|||
  Rat   134 TRDLEVAYNNLLRDKSALEEEKRQLEQENKDLARRLEGSSQEVARLRRGQCPSTHHPSQDMLPGS 198

Human   200 REVSTWNLDTLAFQELKSELTEVPASRILKESPSGYLRSGEGDTGCGELVWVGEPLTLRTAETIT 264
            ||||.|||||||||||||||||||||:||| :.||:.||.|||.|||.|:|||||:|||||||||
  Rat   199 REVSQWNLDTLAFQELKSELTEVPASQILK-NQSGHPRSKEGDKGCGVLMWVGEPVTLRTAETIT 262

Human   265 GKYGVWMRDPKPTYPYTQETTWRIDTVGTDVRQVFEYDLISQFMQGYPSKVHILPRPLESTGAVV 329
            |||||||||||||:|||||||||||||||.:||||||..||||.||||||||:||:.||||||||
  Rat   263 GKYGVWMRDPKPTHPYTQETTWRIDTVGTGIRQVFEYSQISQFEQGYPSKVHVLPQALESTGAVV 327

Human   330 YSGSLYFQGAESRTVIRYELNTETVKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYST 394
            |:|||||||||||||:||||||||||||||||||||||||||:|||||||||||||:||||||||
  Rat   328 YAGSLYFQGAESRTVLRYELNTETVKAEKEIPGAGYHGQFPYAWGGYTDIDLAVDESGLWVIYST 392

Human   395 DEAKGAIVLSKLNPENLELEQTWETNIRKQSVANAFIICGTLYTVSSYTSADATVNFAYDTGTGI 459
            :|.:||||||||||||||||.|||||||||||||||:|||.|||||||:|..||:||||||.|||
  Rat   393 EENRGAIVLSKLNPENLELESTWETNIRKQSVANAFVICGILYTVSSYSSVHATINFAYDTNTGI 457

Human   460 SKTLTIPFKNRYKYSSMIDYNPLEKKLFAWDNLNMVTYDIKLSKM 504
            |||||||||||||||||:||||||:|||||||.||||||||||:|
  Rat   458 SKTLTIPFKNRYKYSSMVDYNPLERKLFAWDNFNMVTYDIKLSEM 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYOCNP_000252.1 COG4913 <71..>196 CDD:443941 87/124 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..131 15/24 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..200 19/29 (66%)
OLF 246..502 CDD:470611 225/255 (88%)
Microbody targeting signal. /evidence=ECO:0000255 502..504 1/1 (100%)
MyocNP_110492.2 COG4372 64..>181 CDD:443500 84/116 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..198 21/31 (68%)
OLF 244..501 CDD:128580 226/256 (88%)

Return to query results.
Submit another query.