DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO7B and myo52

DIOPT Version :10

Sequence 1:XP_047300391.1 Gene:MYO7B / 4648 HGNCID:7607 Length:2298 Species:Homo sapiens
Sequence 2:NP_588492.1 Gene:myo52 / 2538846 PomBaseID:SPCC1919.10C Length:1516 Species:Schizosaccharomyces pombe


Alignment Length:902 Identity:326/902 - (36%)
Similarity:497/902 - (55%) Gaps:84/902 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    24 IGGIIK----EAKPGKVLVEDDEGKEH--WIRAEDFGVLS----PMHPNSVQGVDDMIRLGDLNE 78
            |.|.||    |.:...:.|:|:...|.  .::.:|.....    |...:.....||:..|..|||
pombe    22 IPGSIKDCRVEGEKAFLTVQDENENETVITVKPDDLNYEGRNGLPFLRSINSDADDLTDLSYLNE 86

Human    79 AGMVHNLLIRYQQHKIYTYTGSILVAVNPFQVLP-LYTLEQVQLYYSRHMGELPPHVFAIANNCY 142
            ..::..|..||.|.:||||:|.:|:||||||.|| |||.|.|:.|..:...||.||::|||.:.|
pombe    87 PSVLDALSTRYNQLQIYTYSGIVLIAVNPFQRLPNLYTHEIVRAYSEKSRDELDPHLYAIAEDSY 151

Human   143 FSMKRNKRDQCCIISGESGAGKTETTKLILQFLATISG-------------QHSWIEQQVLEANP 194
            ..|.:..::|..|||||||||||.:.:.|:::.|::..             |.:.:|.::|..||
pombe   152 KCMNQEHKNQTIIISGESGAGKTVSARYIMRYFASVQALIQSTDSNFHEAPQLTAVENEILATNP 216

Human   195 ILEAFGNAKTIRNDNSSRFGKYIDIYFNPSGVIEGARIEQFLLEKSRVCRQAPEERNYHIFYCML 259
            |:|||||:||.||||||||||||.|.|:.:..|.||:|:.:|||:||:..|..:||||||||.:|
pombe   217 IMEAFGNSKTSRNDNSSRFGKYIQILFDGNATIIGAKIQTYLLERSRLVFQPNQERNYHIFYQIL 281

Human   260 MGVSAEDKQLLSLGTPS-EYHYLTMGNCTSCEGLNDAKDYAHIRSAMKILQFSDSESWDVIKLLA 323
            .|.|:|..:...|...| |::||..|||::.||:||.:::.....|:|.:...:.....:..|||
pombe   282 AGSSSEQLEKWKLVENSQEFNYLKQGNCSTIEGVNDKEEFKATVDALKTVGIDNDTCECIFSLLA 346

Human   324 AILHLGNV--------GFMASVFENLDASDVMETPAFPTVMKLLEVQHQELRDCLIKHTILIRGE 380
            |:||:||:        .::.|..|||           .....||.|....|...|.|..|.:..|
pombe   347 ALLHIGNIEVKHSRNDAYIDSKNENL-----------INATSLLGVDPSSLVKWLTKRKIKMASE 400

Human   381 FVTRSLNIAQAADRRDAFVKGIYGHLFLWIVKKINAAIFTPPAQDPKNVRRAIGLLDIFGFENFE 445
            .:.:.||..||...||:..|.:|..||.|:|..||.|:.....:..:..:..||:|||:|||:|:
pombe   401 GILKPLNEFQAVVARDSVAKFLYASLFDWLVATINKALMYSADKSNQTAKSFIGVLDIYGFEHFK 465

Human   446 NNSFEQLCINFANEHLQQFFVQHVFTMEQEEYRSENISWDYIHYTDNRPTLDLLALKPMSIISLL 510
            .|||||.|||:|||.|||.|.:|||.:|||||.:|.::|.||.|.||:..:.::..: :.|:|||
pombe   466 KNSFEQFCINYANEKLQQEFYRHVFKLEQEEYAAEGLNWSYIDYQDNQQCISMIESR-LGILSLL 529

Human   511 DEESRFPQGTDLTMLQKLNSVHANNKAFLQP--KNIHD-ARFG-----IAHFAGEVYYQAEGFLE 567
            |||.|.|..:|...:.|||.      ||.:|  ||.:. :|||     |.|:|.:|.|.||||::
pombe   530 DEECRMPTNSDENWVSKLND------AFSKPEFKNSYQKSRFGNKEFTIKHYALDVVYCAEGFID 588

Human   568 KNRDVLSTDILTLVYSSKNKFLREIFNLELAETKLGHGTIRQAKAGNHLFKSADSNKRPSTLGSQ 632
            ||||.:|.::|.|..:|...|::::....|.:|.....|           |...:..:.:||||.
pombe   589 KNRDTISDELLELFTNSDVPFVKDLVLFRLEQTAPPADT-----------KKIKTKPKSNTLGSM 642

Human   633 FKQSLDQLMKILTNCQPYFIRCIKPNEYKKPLLFDRELCLRQLRYSGMMETVHIRKSGFPIRYTF 697
            ||.||..||..:.....::||||||||.|:...||.::.:.|||..|::||:.|..:|||.|:||
pombe   643 FKSSLVSLMSTINETNAHYIRCIKPNEEKEAWKFDNQMVVSQLRACGVLETIKISCAGFPSRWTF 707

Human   698 EEFSQRFGVLLPNAMRMQLQGKLRQMTLGITDVWLRTDKD---WKAGKTKIFLRDHQDTLLEVQR 759
            :||..|:.:|:|:|:|       ...:|..:...|....|   ::.||||||.|.....|||..|
pombe   708 DEFVSRYYMLVPSAVR-------TTESLTFSKAILEKHADPTKYQIGKTKIFFRSGVTPLLESAR 765

Human   760 SQVLDRAALSIQKVLRGYRYRKEFLRQRRAAVTLQAWWRGYCNRRN--FKLILVGFERLQAIARS 822
            .:.|..||..:.:......||..||..|:...:.||...|:.:||:  ::|:.....:||::.|:
pombe   766 DKALKHAAHLLYEAFAVNYYRTRFLLSRKRVRSFQAVAHGFLSRRHTEYELLSSNIIKLQSLWRT 830

Human   823 QPLARQYQAMRQRTVQLQALCRGYLVRQQVQAKRR--AVVVIQAHARGMAARRNFQQ 877
            ....:::...:...:::|::.||:|:||.::.|.:  |.::||:......|.:::::
pombe   831 ALKRKEFIQTKNSILKVQSIIRGFLLRQTLEEKTKHDATLIIQSLWLTFKAHKHYKE 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO7BXP_047300391.1 MYSc_Myo7 79..748 CDD:276832 277/702 (39%)
IQ 785..807 CDD:197470 6/23 (26%)
MyTH4 992..1221 CDD:214535
FERM1_F1_Myosin-VII 1225..1323 CDD:340612
FERM_C1_MyoVII 1467..1550 CDD:270019
SH3 1551..1611 CDD:473055
MyTH4 1692..1839 CDD:214535
FERM2_F1_Myosin-VII 1846..1943 CDD:340613
B41 1848..2060 CDD:214604
FERM_C2_MyoVII 2056..>2131 CDD:270020
myo52NP_588492.1 COG5022 1..1501 CDD:227355 326/902 (36%)
Blue background indicates that the domain is not in the aligned region.

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