DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and FRQ1

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_010661.3 Gene:FRQ1 / 851979 SGDID:S000002781 Length:190 Species:Saccharomyces cerevisiae


Alignment Length:193 Identity:55/193 - (28%)
Similarity:95/193 - (49%) Gaps:29/193 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETS-------LPMEMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNP 53
            ||.:||       ..::..:.||..||::..|.|.: |.. ||.|:.::|:.:     |......
Yeast     1 MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLR-DCP-SGQLAREDFVKIYKQFFPFGSPED 63

  Fly    54 LVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGEL------ 112
            ....:..:||.|.||.:.|:|||..:|..| :|....||.:||.:||:::||||:..|:      
Yeast    64 FANHLFTVFDKDNNGFIHFEEFITVLSTTS-RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127

  Fly   113 -FQVLKMMVGNNLKDTQLQQIVDKTIGFADKDEDGKISFDEF-------CSVVGNTDIHKKMV 167
             ::::..||..|..:...:..|.|.....||:|||.|:.|||       .|::|..:::..::
Yeast   128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYDGLI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 47/155 (30%)
FRQ1NP_010661.3 FRQ1 24..174 CDD:444056 47/152 (31%)

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