DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and AT1G05990

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_172089.1 Gene:AT1G05990 / 837108 AraportID:AT1G05990 Length:150 Species:Arabidopsis thaliana


Alignment Length:150 Identity:37/150 - (24%)
Similarity:72/150 - (48%) Gaps:25/150 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DADEIRRLGKRFRKLDLDNSGALSVDEF--------MSLPELQQNPLVQRVIDIFDADGNGEVDF 72
            |..|::|:   |:..|.:..|.::..|.        :.:|:.:...:::::    |.:|:|.||.
plant     2 DPTELKRV---FQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKI----DVNGDGCVDI 59

  Fly    73 KEFIQGVSQFSVKGDKLSK-LRFAFRIYDMDNDGYISNGELFQVLK---MMVGNNLKDTQLQQIV 133
            .||.:.......:.|:..: ::.||.::|.:.||:|:..||..||.   :..|..|.|.:     
plant    60 DEFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCK----- 119

  Fly   134 DKTIGFADKDEDGKISFDEF 153
             |.|...|.|.||::::.||
plant   120 -KMIKKVDVDGDGRVNYKEF 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 36/149 (24%)
AT1G05990NP_172089.1 PTZ00184 5..142 CDD:185504 35/146 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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