DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and TCH2

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001318691.1 Gene:TCH2 / 833755 AraportID:AT5G37770 Length:161 Species:Arabidopsis thaliana


Alignment Length:156 Identity:51/156 - (32%)
Similarity:77/156 - (49%) Gaps:28/156 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DEIRRLGKRFRKLDLDNSGALSVDEFMSL---------PELQQNPLVQRVIDIFDADGNGEVDFK 73
            |:|:::   |::.|.:..|.:||||...:         ||.....:.|     ||.||||.:|..
plant    16 DDIKKV---FQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQ-----FDLDGNGFIDLD 72

  Fly    74 EFIQGVSQFSVKG-----DKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133
            ||: .:.|..:.|     :.:|.|:.||.:||:|.:|.||..||..|:|     ||.:....|..
plant    73 EFV-ALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMK-----NLGEKCSVQDC 131

  Fly   134 DKTIGFADKDEDGKISFDEFCSVVGN 159
            .|.|...|.|.||.::||||..::.|
plant   132 KKMISKVDIDGDGCVNFDEFKKMMSN 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 49/149 (33%)
TCH2NP_001318691.1 PTZ00184 19..155 CDD:185504 48/149 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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