DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and AT3G18430

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001189924.1 Gene:AT3G18430 / 821372 AraportID:AT3G18430 Length:175 Species:Arabidopsis thaliana


Alignment Length:179 Identity:52/179 - (29%)
Similarity:100/179 - (55%) Gaps:16/179 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETSLPMEM--------CSN-FDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQ 56
            |||.:|:..:.        |.: |:..||..|.:||.:||.:..|.:|.|||:|:||...|||.|
plant     1 MGNTSSMLTQYDIEEVQSHCHDLFEQQEILSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQ 65

  Fly    57 RVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVG 121
            |::.:.|.     ::||:|:..:|.||.|.....|::..|::||.|.:|.:|..::.:||:.:.|
plant    66 RLLKMVDG-----LNFKDFVAFLSAFSAKASLRQKVQLIFKVYDSDCNGKVSFKDIMEVLRDLSG 125

  Fly   122 NNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVVGNTDIHKKMVVDV 170
            :.:.|.|.:|::.:.:..:....|..::.::|..:.|::  ..:|.|::
plant   126 SFMSDEQREQVLSQVLKESGYTSDSFLTLEDFIKIFGSS--RPEMDVEI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 43/141 (30%)
AT3G18430NP_001189924.1 FRQ1 24..161 CDD:227455 44/141 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68099
Inparanoid 1 1.050 91 1.000 Inparanoid score I2267
OMA 1 1.010 - - QHG53747
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 1 1.000 - - FOG0000640
OrthoInspector 1 1.000 - - otm2564
orthoMCL 1 0.900 - - OOG6_101614
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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