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Protein Alignment CanB2 and Cib1
DIOPT Version :9
Sequence 1: | NP_001246192.1 |
Gene: | CanB2 / 46456 |
FlyBaseID: | FBgn0015614 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038948271.1 |
Gene: | Cib1 / 81823 |
RGDID: | 620133 |
Length: | 203 |
Species: | Rattus norvegicus |
Alignment Length: | 178 |
Identity: | 45/178 - (25%) |
Similarity: | 87/178 - (48%) |
Gaps: | 19/178 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 GNETSLPMEMCSNFD------ADEIRRLGKRF--------RKLDLDNSGALSVDEFMSLPELQQN 52
|:.:.|..|:.:.:. ..||....:|| |.::......:|.::.:|||||:.|
Rat 3 GSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPPEHRTVEESLHTRVSFEQILSLPELKAN 67
Fly 53 PLVQRVIDIFDADGNGE-VDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVL 116
|..:|:..:|......: :.|::|:..:|.||.......|..:||||:|.|:||.:...:|.:::
Rat 68 PFKERICMVFSTSPTRDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLDREDLSRLV 132
Fly 117 KMMVG----NNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVVGNT 160
..:.| ..|..::::|::|..:..:|.|.||.|:..||..|:..:
Rat 133 NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB2 | NP_001246192.1 |
FRQ1 |
13..154 |
CDD:227455 |
40/159 (25%) |
Cib1 | XP_038948271.1 |
EFh |
111..178 |
CDD:238008 |
21/66 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0034 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.820 |
|
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