DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and Kcnip3

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_017447516.1 Gene:Kcnip3 / 65199 RGDID:70888 Length:290 Species:Rattus norvegicus


Alignment Length:157 Identity:44/157 - (28%)
Similarity:82/157 - (52%) Gaps:23/157 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            :.|...|::.|.:.|:     |   :|.:..|.|..:     |:.........:.:.|||||||.
  Rat   120 TKFTKKELQSLYRGFK-----NECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGA 179

  Fly    70 VDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGNNL-----KD 126
            :.|::|:.|:| ..::|....||::||.:||::.||||:..|:..::|.   |:|.:.     :|
  Rat   180 IHFEDFVVGLS-ILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILRED 243

  Fly   127 TQLQQIVDKTIGFADKDEDGKISFDEF 153
            ..|:. |::.....|:::||.::.|||
  Rat   244 APLEH-VERFFQKMDRNQDGVVTIDEF 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 42/150 (28%)
Kcnip3XP_017447516.1 FRQ1 141..275 CDD:444056 39/131 (30%)

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