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Protein Alignment CanB2 and Kcnip1
DIOPT Version :9
Sequence 1: | NP_001246192.1 |
Gene: | CanB2 / 46456 |
FlyBaseID: | FBgn0015614 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246167.1 |
Gene: | Kcnip1 / 65023 |
RGDID: | 70886 |
Length: | 245 |
Species: | Rattus norvegicus |
Alignment Length: | 160 |
Identity: | 45/160 - (28%) |
Similarity: | 79/160 - (49%) |
Gaps: | 21/160 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 MEMCSNFDADEIRRLGKRFRKLDLDN---SGALSVDEFMSL-----PELQQNPLVQRVIDIFDAD 65
:|..:||...|::.|.:.|: | ||.::.:.|..: |....:.....:.:.||..
Rat 71 LEAQTNFTKRELQVLYRGFK-----NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTT 130
Fly 66 GNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGNN---- 123
..|.|.|::|:..:| ..::|....|||:.|.:||::.||||:..|:..::|. |:|..
Rat 131 QTGSVKFEDFVTALS-ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 194
Fly 124 LKDTQLQQIVDKTIGFADKDEDGKISFDEF 153
||:...:|.||......||::||.::.|||
Rat 195 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 224
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB2 | NP_001246192.1 |
FRQ1 |
13..154 |
CDD:227455 |
44/156 (28%) |
Kcnip1 | XP_006246167.1 |
FRQ1 |
68..234 |
CDD:227455 |
45/160 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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