DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and RCVRN

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_002894.1 Gene:RCVRN / 5957 HGNCID:9937 Length:200 Species:Homo sapiens


Alignment Length:185 Identity:45/185 - (24%)
Similarity:88/185 - (47%) Gaps:26/185 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETS--------LPMEMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQN 52
            |||..|        ..:::.:.|..:|:....:.|.| |.. :|.::..:|.|:     |:....
Human     1 MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLK-DCP-TGRITQQQFQSIYAKFFPDTDPK 63

  Fly    53 PLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVL- 116
            ...|.|...||::.:|.:||||::..: ..:..|....||.:||.:||:|.:|.||..|:.::: 
Human    64 AYAQHVFRSFDSNLDGTLDFKEYVIAL-HMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVM 127

  Fly   117 ---KMMVGNNLK-----DTQLQQIVDKTIGFADKDEDGKISFDEFC-SVVGNTDI 162
               ||:...::|     :...::..:|...:..|::|.|::..||. ..:.|.:|
Human   128 AIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEI 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 38/154 (25%)
RCVRNNP_002894.1 FRQ1 14..182 CDD:227455 40/170 (24%)
Interaction with GRK1. /evidence=ECO:0000250|UniProtKB:P21457 189..192
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53747
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.930

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