DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and rcvrn3

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_957119.2 Gene:rcvrn3 / 572207 ZFINID:ZDB-GENE-040426-1661 Length:191 Species:Danio rerio


Alignment Length:183 Identity:44/183 - (24%)
Similarity:86/183 - (46%) Gaps:25/183 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETS--LPME------MCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQN 52
            |||..|  :|.|      :.:.|...||.:..:.|:|  ...:|.:::.:|..:     |:....
Zfish     1 MGNAQSGGIPREILDDLKLTTRFSESEITQWYENFQK--QCPTGRITLQQFEEIYGKFFPDSDAT 63

  Fly    53 PLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLK 117
            ...|.|...|||:.:|.:||||::..:...| .|....||.:||.::|:|.:||::..|:.::.:
Zfish    64 TYAQHVFRSFDANDDGTLDFKEYVVALHMTS-SGKSTLKLEWAFSLFDVDKNGYVTKPEVIELSQ 127

  Fly   118 MMVGNNLKDTQL---------QQIVDKTIGFADKDEDGKISFDEFCSVVGNTD 161
            .:.....||.|.         ::..:|.....||.::.:::..||...:.::|
Zfish   128 AIFKLIPKDKQTSLPNDESTPEKRAEKLWAIFDKKDNERVAEGEFIEAIQSSD 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 36/154 (23%)
rcvrn3NP_957119.2 FRQ1 16..179 CDD:227455 37/165 (22%)
EFh 65..125 CDD:238008 21/60 (35%)
EFh 101..177 CDD:298682 17/75 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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