DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and ncalda

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001107882.1 Gene:ncalda / 556178 ZFINID:ZDB-GENE-080220-28 Length:193 Species:Danio rerio


Alignment Length:153 Identity:50/153 - (32%)
Similarity:85/153 - (55%) Gaps:15/153 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGNGEVDF 72
            ::|...||:...|.|.: |.. ||.||::||..:     |....:...:.|...|||:|:|.:||
Zfish    20 TDFTEHEIQEWYKGFLR-DCP-SGNLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82

  Fly    73 KEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLK---MMVGNNLK----DTQLQ 130
            :|||..:|..| :|....||::||.:||:|.:||||..|:.::::   .||.:.:|    ::..:
Zfish    83 REFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGYISKSEMLEIVQAIYKMVSSVMKMPEDESTPE 146

  Fly   131 QIVDKTIGFADKDEDGKISFDEF 153
            :..:|.....|.:.|||:|.:||
Zfish   147 KRTEKIFRQMDTNRDGKLSLEEF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 48/146 (33%)
ncaldaNP_001107882.1 FRQ1 21..174 CDD:444056 50/152 (33%)

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