DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and ncaldb

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001003776.1 Gene:ncaldb / 445319 ZFINID:ZDB-GENE-040808-37 Length:192 Species:Danio rerio


Alignment Length:170 Identity:54/170 - (31%)
Similarity:85/170 - (50%) Gaps:40/170 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LGKRFRKLD-------LDN--------------------SGALSVDEFMSL-----PELQQNPLV 55
            :||:..||.       |||                    |||||:|||..:     |....:...
Zfish     1 MGKQNSKLRPEVIQDLLDNTDFTEHEILEWYKGFLRDCPSGALSMDEFKKIYGNFFPYGDASKFA 65

  Fly    56 QRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLK--- 117
            :.|...|||:|:|.:||:|||..:|..| :|....||::||.:||:|.:||||..|:.::::   
Zfish    66 EHVFRTFDANGDGTIDFREFIIALSVTS-RGRLDQKLKWAFSMYDLDGNGYISKAEMLEIVQAIY 129

  Fly   118 MMVGNNLK----DTQLQQIVDKTIGFADKDEDGKISFDEF 153
            .||.:.:|    ::..::..||.....|.:.|||:|.:||
Zfish   130 KMVSSVMKMPEDESTPEKRTDKIFRQMDTNRDGKLSLEEF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 54/170 (32%)
ncaldbNP_001003776.1 FRQ1 21..174 CDD:444056 47/150 (31%)

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