DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and CG5890

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster


Alignment Length:167 Identity:42/167 - (25%)
Similarity:78/167 - (46%) Gaps:17/167 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EMC--SNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGN 67
            ::|  :.|...|||.:.:.| |.:.. .|.:..|.|..:     |....:.....|...||.:.|
  Fly    31 DLCRQTKFTKQEIRVMYRGF-KTECP-EGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93

  Fly    68 GEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQV---LKMMVGNN----LK 125
            |.:.|::.:..:|.. ::|....:||:.|::||::.||.||.|||.::   :..::|..    ..
  Fly    94 GAISFRDLLVTLSTL-LRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPED 157

  Fly   126 DTQLQQIVDKTIGFADKDEDGKISFDEFCSVVGNTDI 162
            |.:.:..||:.....|.::||.|:.:||.......|:
  Fly   158 DRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDL 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 38/148 (26%)
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 30/108 (28%)

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